Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC15.03■□□□□ -0
Cstf1Q99LC2 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cstf1Q99LC2 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cstf1Q99LC2 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cstf1Q99LC2 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cstf1Q99LC2 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cstf1Q99LC2 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cstf1Q99LC2 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cstf1Q99LC2 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cstf1Q99LC2 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cstf1Q99LC2 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cstf1Q99LC2 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cstf1Q99LC2 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Cstf1Q99LC2 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cstf1Q99LC2 Gm15222-202ENSMUST00000228667 1726 ntBASIC15.03■□□□□ -0
Cstf1Q99LC2 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.03■□□□□ -0
Cstf1Q99LC2 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cstf1Q99LC2 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cstf1Q99LC2 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cstf1Q99LC2 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cstf1Q99LC2 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Cstf1Q99LC2 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cstf1Q99LC2 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cstf1Q99LC2 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.02■□□□□ -0
Cstf1Q99LC2 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Cstf1Q99LC2 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cstf1Q99LC2 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Cstf1Q99LC2 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Cstf1Q99LC2 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cstf1Q99LC2 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.02■□□□□ -0
Cstf1Q99LC2 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.02■□□□□ -0
Cstf1Q99LC2 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cstf1Q99LC2 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.02■□□□□ -0
Cstf1Q99LC2 Gm43433-201ENSMUST00000196573 481 ntBASIC15.02■□□□□ -0
Cstf1Q99LC2 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC15.02■□□□□ -0
Cstf1Q99LC2 AC124732.1-201ENSMUST00000221551 910 ntBASIC15.02■□□□□ -0
Cstf1Q99LC2 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Cstf1Q99LC2 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Cstf1Q99LC2 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.02■□□□□ -0
Cstf1Q99LC2 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cstf1Q99LC2 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cstf1Q99LC2 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cstf1Q99LC2 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cstf1Q99LC2 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cstf1Q99LC2 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cstf1Q99LC2 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cstf1Q99LC2 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cstf1Q99LC2 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cstf1Q99LC2 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cstf1Q99LC2 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cstf1Q99LC2 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cstf1Q99LC2 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC15.01□□□□□ -0.01
Cstf1Q99LC2 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf1Q99LC2 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Cstf1Q99LC2 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf1Q99LC2 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf1Q99LC2 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf1Q99LC2 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf1Q99LC2 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf1Q99LC2 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Cstf1Q99LC2 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Cstf1Q99LC2 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf1Q99LC2 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf1Q99LC2 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Cstf1Q99LC2 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf1Q99LC2 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf1Q99LC2 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf1Q99LC2 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.01□□□□□ -0.01
Cstf1Q99LC2 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf1Q99LC2 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf1Q99LC2 Gm12490-201ENSMUST00000120255 560 ntBASIC15.01□□□□□ -0.01
Cstf1Q99LC2 Gm25144-201ENSMUST00000179561 110 ntBASIC15.01□□□□□ -0.01
Cstf1Q99LC2 Gm25352-201ENSMUST00000179815 110 ntBASIC15.01□□□□□ -0.01
Cstf1Q99LC2 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC15.01□□□□□ -0.01
Cstf1Q99LC2 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Cstf1Q99LC2 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC15.01□□□□□ -0.01
Cstf1Q99LC2 Cdk7-205ENSMUST00000225990 1159 ntBASIC15.01□□□□□ -0.01
Cstf1Q99LC2 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf1Q99LC2 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Cstf1Q99LC2 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf1Q99LC2 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf1Q99LC2 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf1Q99LC2 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cstf1Q99LC2 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf1Q99LC2 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf1Q99LC2 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Cstf1Q99LC2 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cstf1Q99LC2 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Cstf1Q99LC2 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15□□□□□ -0.01
Cstf1Q99LC2 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cstf1Q99LC2 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cstf1Q99LC2 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cstf1Q99LC2 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cstf1Q99LC2 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cstf1Q99LC2 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cstf1Q99LC2 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Cstf1Q99LC2 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Cstf1Q99LC2 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
Cstf1Q99LC2 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cstf1Q99LC2 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms