Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC17.72■□□□□ 0.43
Col20a1Q923P0 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col20a1Q923P0 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col20a1Q923P0 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Col20a1Q923P0 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Col20a1Q923P0 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC17.72■□□□□ 0.43
Col20a1Q923P0 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col20a1Q923P0 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col20a1Q923P0 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col20a1Q923P0 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col20a1Q923P0 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Col20a1Q923P0 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col20a1Q923P0 Gm9824-201ENSMUST00000178707 561 ntBASIC17.72■□□□□ 0.43
Col20a1Q923P0 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col20a1Q923P0 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col20a1Q923P0 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col20a1Q923P0 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col20a1Q923P0 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col20a1Q923P0 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col20a1Q923P0 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col20a1Q923P0 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Col20a1Q923P0 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
Col20a1Q923P0 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Col20a1Q923P0 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Col20a1Q923P0 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col20a1Q923P0 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col20a1Q923P0 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Col20a1Q923P0 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Col20a1Q923P0 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.71■□□□□ 0.43
Col20a1Q923P0 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col20a1Q923P0 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col20a1Q923P0 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col20a1Q923P0 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Col20a1Q923P0 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC17.71■□□□□ 0.42
Col20a1Q923P0 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.71■□□□□ 0.42
Col20a1Q923P0 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Col20a1Q923P0 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC17.71■□□□□ 0.42
Col20a1Q923P0 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Col20a1Q923P0 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
Col20a1Q923P0 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.71■□□□□ 0.42
Col20a1Q923P0 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Col20a1Q923P0 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Col20a1Q923P0 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col20a1Q923P0 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col20a1Q923P0 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.7■□□□□ 0.42
Col20a1Q923P0 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Col20a1Q923P0 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.7■□□□□ 0.42
Col20a1Q923P0 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col20a1Q923P0 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col20a1Q923P0 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.7■□□□□ 0.42
Col20a1Q923P0 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col20a1Q923P0 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col20a1Q923P0 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col20a1Q923P0 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col20a1Q923P0 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col20a1Q923P0 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col20a1Q923P0 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Col20a1Q923P0 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col20a1Q923P0 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col20a1Q923P0 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col20a1Q923P0 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col20a1Q923P0 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col20a1Q923P0 Gm15693-201ENSMUST00000120470 637 ntBASIC17.7■□□□□ 0.42
Col20a1Q923P0 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col20a1Q923P0 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC17.7■□□□□ 0.42
Col20a1Q923P0 Gm5779-201ENSMUST00000218467 910 ntBASIC17.7■□□□□ 0.42
Col20a1Q923P0 AC158982.1-201ENSMUST00000228377 901 ntBASIC17.7■□□□□ 0.42
Col20a1Q923P0 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col20a1Q923P0 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Col20a1Q923P0 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.7■□□□□ 0.42
Col20a1Q923P0 AC154767.3-201ENSMUST00000225150 1342 ntBASIC17.69■□□□□ 0.42
Col20a1Q923P0 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Col20a1Q923P0 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col20a1Q923P0 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC17.69■□□□□ 0.42
Col20a1Q923P0 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col20a1Q923P0 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col20a1Q923P0 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col20a1Q923P0 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.69■□□□□ 0.42
Col20a1Q923P0 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col20a1Q923P0 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.69■□□□□ 0.42
Col20a1Q923P0 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Col20a1Q923P0 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col20a1Q923P0 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col20a1Q923P0 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col20a1Q923P0 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
Col20a1Q923P0 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col20a1Q923P0 Klk2-ps-201ENSMUST00000205342 571 ntBASIC17.69■□□□□ 0.42
Col20a1Q923P0 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.69■□□□□ 0.42
Col20a1Q923P0 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col20a1Q923P0 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Col20a1Q923P0 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Col20a1Q923P0 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Col20a1Q923P0 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col20a1Q923P0 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col20a1Q923P0 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col20a1Q923P0 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col20a1Q923P0 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col20a1Q923P0 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col20a1Q923P0 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col20a1Q923P0 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms