Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha3Q91Y16 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.73■□□□□ 0.11
Pcdha3Q91Y16 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha3Q91Y16 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Pcdha3Q91Y16 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha3Q91Y16 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Pcdha3Q91Y16 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha3Q91Y16 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.72■□□□□ 0.11
Pcdha3Q91Y16 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha3Q91Y16 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha3Q91Y16 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha3Q91Y16 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha3Q91Y16 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha3Q91Y16 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha3Q91Y16 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha3Q91Y16 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
Pcdha3Q91Y16 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Pcdha3Q91Y16 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha3Q91Y16 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha3Q91Y16 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Pcdha3Q91Y16 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha3Q91Y16 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha3Q91Y16 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha3Q91Y16 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha3Q91Y16 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha3Q91Y16 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Pcdha3Q91Y16 Gm12260-201ENSMUST00000122447 411 ntBASIC15.72■□□□□ 0.11
Pcdha3Q91Y16 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.72■□□□□ 0.11
Pcdha3Q91Y16 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha3Q91Y16 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.72■□□□□ 0.11
Pcdha3Q91Y16 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Pcdha3Q91Y16 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha3Q91Y16 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha3Q91Y16 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.72■□□□□ 0.11
Pcdha3Q91Y16 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha3Q91Y16 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha3Q91Y16 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha3Q91Y16 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha3Q91Y16 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Pcdha3Q91Y16 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Pcdha3Q91Y16 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha3Q91Y16 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha3Q91Y16 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.71■□□□□ 0.11
Pcdha3Q91Y16 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha3Q91Y16 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha3Q91Y16 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha3Q91Y16 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Pcdha3Q91Y16 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.71■□□□□ 0.11
Pcdha3Q91Y16 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha3Q91Y16 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha3Q91Y16 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha3Q91Y16 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha3Q91Y16 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
Pcdha3Q91Y16 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha3Q91Y16 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Pcdha3Q91Y16 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Pcdha3Q91Y16 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha3Q91Y16 Gm15467-201ENSMUST00000120582 445 ntBASIC15.71■□□□□ 0.11
Pcdha3Q91Y16 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.71■□□□□ 0.11
Pcdha3Q91Y16 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha3Q91Y16 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha3Q91Y16 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Pcdha3Q91Y16 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.71■□□□□ 0.11
Pcdha3Q91Y16 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.71■□□□□ 0.11
Pcdha3Q91Y16 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha3Q91Y16 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha3Q91Y16 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.71■□□□□ 0.11
Pcdha3Q91Y16 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha3Q91Y16 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha3Q91Y16 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Pcdha3Q91Y16 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha3Q91Y16 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha3Q91Y16 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha3Q91Y16 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha3Q91Y16 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha3Q91Y16 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdha3Q91Y16 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdha3Q91Y16 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Pcdha3Q91Y16 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdha3Q91Y16 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdha3Q91Y16 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdha3Q91Y16 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdha3Q91Y16 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdha3Q91Y16 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha3Q91Y16 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Pcdha3Q91Y16 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha3Q91Y16 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha3Q91Y16 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha3Q91Y16 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha3Q91Y16 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.7■□□□□ 0.1
Pcdha3Q91Y16 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha3Q91Y16 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.7■□□□□ 0.1
Pcdha3Q91Y16 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha3Q91Y16 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha3Q91Y16 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha3Q91Y16 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha3Q91Y16 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.7■□□□□ 0.1
Pcdha3Q91Y16 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha3Q91Y16 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha3Q91Y16 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms