Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb20Q91XZ9 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb20Q91XZ9 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb20Q91XZ9 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb20Q91XZ9 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb20Q91XZ9 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb20Q91XZ9 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Pcdhb20Q91XZ9 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb20Q91XZ9 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Pcdhb20Q91XZ9 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb20Q91XZ9 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb20Q91XZ9 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb20Q91XZ9 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb20Q91XZ9 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb20Q91XZ9 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb20Q91XZ9 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb20Q91XZ9 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb20Q91XZ9 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Pcdhb20Q91XZ9 Gm28766-201ENSMUST00000191086 234 ntBASIC14.67□□□□□ -0.06
Pcdhb20Q91XZ9 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb20Q91XZ9 Gm37215-201ENSMUST00000194927 1259 ntBASIC14.67□□□□□ -0.06
Pcdhb20Q91XZ9 Gm2213-201ENSMUST00000197485 688 ntBASIC14.67□□□□□ -0.06
Pcdhb20Q91XZ9 Gm43058-201ENSMUST00000197645 625 ntBASIC14.67□□□□□ -0.06
Pcdhb20Q91XZ9 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Pcdhb20Q91XZ9 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb20Q91XZ9 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.67□□□□□ -0.06
Pcdhb20Q91XZ9 CT030194.1-201ENSMUST00000225507 532 ntBASIC14.67□□□□□ -0.06
Pcdhb20Q91XZ9 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb20Q91XZ9 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb20Q91XZ9 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.67□□□□□ -0.06
Pcdhb20Q91XZ9 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.67□□□□□ -0.06
Pcdhb20Q91XZ9 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb20Q91XZ9 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb20Q91XZ9 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb20Q91XZ9 App-207ENSMUST00000227737 2827 ntBASIC14.67□□□□□ -0.06
Pcdhb20Q91XZ9 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb20Q91XZ9 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb20Q91XZ9 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb20Q91XZ9 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.66□□□□□ -0.06
Pcdhb20Q91XZ9 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Pcdhb20Q91XZ9 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb20Q91XZ9 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Pcdhb20Q91XZ9 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.66□□□□□ -0.06
Pcdhb20Q91XZ9 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb20Q91XZ9 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb20Q91XZ9 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb20Q91XZ9 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb20Q91XZ9 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb20Q91XZ9 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
Pcdhb20Q91XZ9 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb20Q91XZ9 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb20Q91XZ9 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.66□□□□□ -0.06
Pcdhb20Q91XZ9 Mir3113-201ENSMUST00000175478 76 ntBASIC14.66□□□□□ -0.06
Pcdhb20Q91XZ9 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.66□□□□□ -0.06
Pcdhb20Q91XZ9 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb20Q91XZ9 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.66□□□□□ -0.06
Pcdhb20Q91XZ9 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC14.66□□□□□ -0.06
Pcdhb20Q91XZ9 Gm37935-201ENSMUST00000192012 982 ntBASIC14.66□□□□□ -0.06
Pcdhb20Q91XZ9 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC14.66□□□□□ -0.06
Pcdhb20Q91XZ9 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.66□□□□□ -0.06
Pcdhb20Q91XZ9 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.66□□□□□ -0.06
Pcdhb20Q91XZ9 Gm272-201ENSMUST00000222073 919 ntBASIC14.66□□□□□ -0.06
Pcdhb20Q91XZ9 Olfr1153-201ENSMUST00000052300 957 ntBASIC14.66□□□□□ -0.06
Pcdhb20Q91XZ9 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb20Q91XZ9 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb20Q91XZ9 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Pcdhb20Q91XZ9 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb20Q91XZ9 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb20Q91XZ9 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb20Q91XZ9 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Pcdhb20Q91XZ9 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb20Q91XZ9 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Pcdhb20Q91XZ9 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb20Q91XZ9 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb20Q91XZ9 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb20Q91XZ9 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Pcdhb20Q91XZ9 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb20Q91XZ9 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Pcdhb20Q91XZ9 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.65□□□□□ -0.06
Pcdhb20Q91XZ9 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb20Q91XZ9 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.65□□□□□ -0.06
Pcdhb20Q91XZ9 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb20Q91XZ9 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb20Q91XZ9 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Pcdhb20Q91XZ9 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb20Q91XZ9 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb20Q91XZ9 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb20Q91XZ9 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Pcdhb20Q91XZ9 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb20Q91XZ9 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb20Q91XZ9 Gm11594-201ENSMUST00000122313 162 ntBASIC14.65□□□□□ -0.06
Pcdhb20Q91XZ9 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.65□□□□□ -0.06
Pcdhb20Q91XZ9 Gm10499-201ENSMUST00000174094 934 ntBASIC14.65□□□□□ -0.06
Pcdhb20Q91XZ9 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.65□□□□□ -0.06
Pcdhb20Q91XZ9 Gm18246-201ENSMUST00000221023 728 ntBASIC14.65□□□□□ -0.06
Pcdhb20Q91XZ9 AC154838.2-201ENSMUST00000226602 747 ntBASIC14.65□□□□□ -0.06
Pcdhb20Q91XZ9 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb20Q91XZ9 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Pcdhb20Q91XZ9 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Pcdhb20Q91XZ9 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms