Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb3Q91XZ7 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb3Q91XZ7 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb3Q91XZ7 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhb3Q91XZ7 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb3Q91XZ7 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb3Q91XZ7 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb3Q91XZ7 Gm15794-201ENSMUST00000120182 631 ntBASIC15.09■□□□□ 0.01
Pcdhb3Q91XZ7 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb3Q91XZ7 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.09■□□□□ 0.01
Pcdhb3Q91XZ7 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb3Q91XZ7 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb3Q91XZ7 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb3Q91XZ7 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC15.09■□□□□ 0.01
Pcdhb3Q91XZ7 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb3Q91XZ7 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb3Q91XZ7 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb3Q91XZ7 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhb3Q91XZ7 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb3Q91XZ7 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb3Q91XZ7 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb3Q91XZ7 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhb3Q91XZ7 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.09■□□□□ 0.01
Pcdhb3Q91XZ7 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb3Q91XZ7 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb3Q91XZ7 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Pcdhb3Q91XZ7 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb3Q91XZ7 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Pcdhb3Q91XZ7 Gm9947-201ENSMUST00000067599 2920 ntBASIC15.08■□□□□ 0
Pcdhb3Q91XZ7 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb3Q91XZ7 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.08■□□□□ 0
Pcdhb3Q91XZ7 Gm7153-201ENSMUST00000117092 455 ntBASIC15.08■□□□□ 0
Pcdhb3Q91XZ7 Olfr129-201ENSMUST00000122318 993 ntBASIC15.08■□□□□ 0
Pcdhb3Q91XZ7 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb3Q91XZ7 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.08■□□□□ 0
Pcdhb3Q91XZ7 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.08■□□□□ 0
Pcdhb3Q91XZ7 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.08■□□□□ 0
Pcdhb3Q91XZ7 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.08■□□□□ 0
Pcdhb3Q91XZ7 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.08■□□□□ 0
Pcdhb3Q91XZ7 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Pcdhb3Q91XZ7 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb3Q91XZ7 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC15.08■□□□□ 0
Pcdhb3Q91XZ7 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.08■□□□□ 0
Pcdhb3Q91XZ7 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb3Q91XZ7 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb3Q91XZ7 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Pcdhb3Q91XZ7 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb3Q91XZ7 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb3Q91XZ7 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb3Q91XZ7 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb3Q91XZ7 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb3Q91XZ7 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb3Q91XZ7 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.07■□□□□ 0
Pcdhb3Q91XZ7 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Pcdhb3Q91XZ7 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Pcdhb3Q91XZ7 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.07■□□□□ 0
Pcdhb3Q91XZ7 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb3Q91XZ7 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb3Q91XZ7 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb3Q91XZ7 Gm10052-201ENSMUST00000168019 960 ntBASIC15.07■□□□□ 0
Pcdhb3Q91XZ7 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Pcdhb3Q91XZ7 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.07■□□□□ 0
Pcdhb3Q91XZ7 Gm7729-201ENSMUST00000050143 801 ntBASIC15.07■□□□□ 0
Pcdhb3Q91XZ7 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb3Q91XZ7 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb3Q91XZ7 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb3Q91XZ7 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb3Q91XZ7 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Pcdhb3Q91XZ7 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb3Q91XZ7 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb3Q91XZ7 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb3Q91XZ7 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb3Q91XZ7 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb3Q91XZ7 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb3Q91XZ7 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Pcdhb3Q91XZ7 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC15.07■□□□□ 0
Pcdhb3Q91XZ7 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.07■□□□□ 0
Pcdhb3Q91XZ7 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb3Q91XZ7 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.06■□□□□ 0
Pcdhb3Q91XZ7 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.06■□□□□ 0
Pcdhb3Q91XZ7 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.06■□□□□ 0
Pcdhb3Q91XZ7 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb3Q91XZ7 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb3Q91XZ7 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb3Q91XZ7 AC166491.1-201ENSMUST00000227053 2308 ntBASIC15.06■□□□□ 0
Pcdhb3Q91XZ7 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb3Q91XZ7 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb3Q91XZ7 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb3Q91XZ7 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Pcdhb3Q91XZ7 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb3Q91XZ7 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb3Q91XZ7 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb3Q91XZ7 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb3Q91XZ7 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb3Q91XZ7 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb3Q91XZ7 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb3Q91XZ7 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.06■□□□□ 0
Pcdhb3Q91XZ7 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb3Q91XZ7 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb3Q91XZ7 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms