Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb8Q91XZ2 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb8Q91XZ2 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.72□□□□□ -0.05
Pcdhb8Q91XZ2 Celf4-206ENSMUST00000224553 1729 ntBASIC14.72□□□□□ -0.05
Pcdhb8Q91XZ2 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.72□□□□□ -0.05
Pcdhb8Q91XZ2 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb8Q91XZ2 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb8Q91XZ2 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb8Q91XZ2 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Pcdhb8Q91XZ2 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb8Q91XZ2 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.71□□□□□ -0.05
Pcdhb8Q91XZ2 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Pcdhb8Q91XZ2 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb8Q91XZ2 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb8Q91XZ2 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb8Q91XZ2 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.71□□□□□ -0.05
Pcdhb8Q91XZ2 Gm9682-201ENSMUST00000197505 556 ntBASIC14.71□□□□□ -0.05
Pcdhb8Q91XZ2 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Pcdhb8Q91XZ2 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb8Q91XZ2 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Pcdhb8Q91XZ2 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Pcdhb8Q91XZ2 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb8Q91XZ2 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb8Q91XZ2 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb8Q91XZ2 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb8Q91XZ2 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb8Q91XZ2 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdhb8Q91XZ2 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdhb8Q91XZ2 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdhb8Q91XZ2 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdhb8Q91XZ2 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb8Q91XZ2 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb8Q91XZ2 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Pcdhb8Q91XZ2 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb8Q91XZ2 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb8Q91XZ2 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb8Q91XZ2 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb8Q91XZ2 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
Pcdhb8Q91XZ2 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Pcdhb8Q91XZ2 Gm7862-201ENSMUST00000121461 292 ntBASIC14.7□□□□□ -0.06
Pcdhb8Q91XZ2 Gm11452-201ENSMUST00000122376 690 ntBASIC14.7□□□□□ -0.06
Pcdhb8Q91XZ2 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Pcdhb8Q91XZ2 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
Pcdhb8Q91XZ2 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.7□□□□□ -0.06
Pcdhb8Q91XZ2 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.7□□□□□ -0.06
Pcdhb8Q91XZ2 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb8Q91XZ2 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.7□□□□□ -0.06
Pcdhb8Q91XZ2 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Pcdhb8Q91XZ2 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
Pcdhb8Q91XZ2 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb8Q91XZ2 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb8Q91XZ2 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb8Q91XZ2 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.7□□□□□ -0.06
Pcdhb8Q91XZ2 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb8Q91XZ2 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb8Q91XZ2 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb8Q91XZ2 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.7□□□□□ -0.06
Pcdhb8Q91XZ2 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.69□□□□□ -0.06
Pcdhb8Q91XZ2 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb8Q91XZ2 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb8Q91XZ2 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb8Q91XZ2 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Pcdhb8Q91XZ2 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb8Q91XZ2 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb8Q91XZ2 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb8Q91XZ2 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.69□□□□□ -0.06
Pcdhb8Q91XZ2 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb8Q91XZ2 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb8Q91XZ2 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb8Q91XZ2 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb8Q91XZ2 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.69□□□□□ -0.06
Pcdhb8Q91XZ2 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdhb8Q91XZ2 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb8Q91XZ2 Gm6550-201ENSMUST00000187574 993 ntBASIC14.69□□□□□ -0.06
Pcdhb8Q91XZ2 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb8Q91XZ2 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb8Q91XZ2 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.69□□□□□ -0.06
Pcdhb8Q91XZ2 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb8Q91XZ2 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdhb8Q91XZ2 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Pcdhb8Q91XZ2 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb8Q91XZ2 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb8Q91XZ2 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb8Q91XZ2 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb8Q91XZ2 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Pcdhb8Q91XZ2 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb8Q91XZ2 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb8Q91XZ2 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb8Q91XZ2 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb8Q91XZ2 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb8Q91XZ2 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Pcdhb8Q91XZ2 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.68□□□□□ -0.06
Pcdhb8Q91XZ2 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb8Q91XZ2 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb8Q91XZ2 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb8Q91XZ2 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb8Q91XZ2 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb8Q91XZ2 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb8Q91XZ2 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Pcdhb8Q91XZ2 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms