Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga11Q91XY8 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Pcdhga11Q91XY8 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga11Q91XY8 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga11Q91XY8 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga11Q91XY8 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga11Q91XY8 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga11Q91XY8 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.56□□□□□ -0.08
Pcdhga11Q91XY8 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.56□□□□□ -0.08
Pcdhga11Q91XY8 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Pcdhga11Q91XY8 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga11Q91XY8 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga11Q91XY8 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga11Q91XY8 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga11Q91XY8 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga11Q91XY8 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga11Q91XY8 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga11Q91XY8 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga11Q91XY8 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga11Q91XY8 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga11Q91XY8 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga11Q91XY8 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga11Q91XY8 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga11Q91XY8 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga11Q91XY8 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga11Q91XY8 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Pcdhga11Q91XY8 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Pcdhga11Q91XY8 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga11Q91XY8 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga11Q91XY8 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Pcdhga11Q91XY8 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Pcdhga11Q91XY8 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Pcdhga11Q91XY8 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga11Q91XY8 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Pcdhga11Q91XY8 Gm11452-201ENSMUST00000122376 690 ntBASIC14.55□□□□□ -0.08
Pcdhga11Q91XY8 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.55□□□□□ -0.08
Pcdhga11Q91XY8 Gm4535-201ENSMUST00000182274 558 ntBASIC14.55□□□□□ -0.08
Pcdhga11Q91XY8 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.55□□□□□ -0.08
Pcdhga11Q91XY8 Gm6296-201ENSMUST00000222599 943 ntBASIC14.55□□□□□ -0.08
Pcdhga11Q91XY8 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga11Q91XY8 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga11Q91XY8 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga11Q91XY8 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga11Q91XY8 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga11Q91XY8 Gm10355-201ENSMUST00000097146 517 ntBASIC14.55□□□□□ -0.08
Pcdhga11Q91XY8 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga11Q91XY8 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga11Q91XY8 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga11Q91XY8 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga11Q91XY8 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga11Q91XY8 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.55□□□□□ -0.08
Pcdhga11Q91XY8 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.55□□□□□ -0.08
Pcdhga11Q91XY8 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga11Q91XY8 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga11Q91XY8 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga11Q91XY8 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga11Q91XY8 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga11Q91XY8 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga11Q91XY8 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga11Q91XY8 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga11Q91XY8 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga11Q91XY8 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga11Q91XY8 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga11Q91XY8 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga11Q91XY8 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga11Q91XY8 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga11Q91XY8 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.54□□□□□ -0.08
Pcdhga11Q91XY8 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.54□□□□□ -0.08
Pcdhga11Q91XY8 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga11Q91XY8 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga11Q91XY8 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga11Q91XY8 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga11Q91XY8 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga11Q91XY8 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga11Q91XY8 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga11Q91XY8 Gm11780-201ENSMUST00000136880 516 ntBASIC14.54□□□□□ -0.08
Pcdhga11Q91XY8 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga11Q91XY8 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga11Q91XY8 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga11Q91XY8 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdhga11Q91XY8 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.54□□□□□ -0.08
Pcdhga11Q91XY8 Rps4l-201ENSMUST00000071745 943 ntBASIC14.54□□□□□ -0.08
Pcdhga11Q91XY8 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga11Q91XY8 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga11Q91XY8 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.54□□□□□ -0.08
Pcdhga11Q91XY8 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga11Q91XY8 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga11Q91XY8 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga11Q91XY8 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga11Q91XY8 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga11Q91XY8 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga11Q91XY8 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga11Q91XY8 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga11Q91XY8 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhga11Q91XY8 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhga11Q91XY8 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhga11Q91XY8 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhga11Q91XY8 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhga11Q91XY8 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhga11Q91XY8 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms