Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh18Q8VHR0 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.55□□□□□ -0.08
Pcdh18Q8VHR0 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh18Q8VHR0 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh18Q8VHR0 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh18Q8VHR0 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh18Q8VHR0 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh18Q8VHR0 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.55□□□□□ -0.08
Pcdh18Q8VHR0 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh18Q8VHR0 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh18Q8VHR0 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh18Q8VHR0 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh18Q8VHR0 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh18Q8VHR0 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.55□□□□□ -0.08
Pcdh18Q8VHR0 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh18Q8VHR0 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh18Q8VHR0 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh18Q8VHR0 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh18Q8VHR0 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh18Q8VHR0 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh18Q8VHR0 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh18Q8VHR0 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.55□□□□□ -0.08
Pcdh18Q8VHR0 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Pcdh18Q8VHR0 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh18Q8VHR0 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh18Q8VHR0 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Pcdh18Q8VHR0 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh18Q8VHR0 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh18Q8VHR0 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh18Q8VHR0 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.54□□□□□ -0.08
Pcdh18Q8VHR0 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdh18Q8VHR0 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh18Q8VHR0 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdh18Q8VHR0 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdh18Q8VHR0 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Pcdh18Q8VHR0 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh18Q8VHR0 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh18Q8VHR0 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh18Q8VHR0 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh18Q8VHR0 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdh18Q8VHR0 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.54□□□□□ -0.08
Pcdh18Q8VHR0 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh18Q8VHR0 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh18Q8VHR0 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh18Q8VHR0 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Pcdh18Q8VHR0 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Pcdh18Q8VHR0 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Pcdh18Q8VHR0 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh18Q8VHR0 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Pcdh18Q8VHR0 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.54□□□□□ -0.08
Pcdh18Q8VHR0 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh18Q8VHR0 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh18Q8VHR0 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh18Q8VHR0 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh18Q8VHR0 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.53□□□□□ -0.08
Pcdh18Q8VHR0 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh18Q8VHR0 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Pcdh18Q8VHR0 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh18Q8VHR0 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh18Q8VHR0 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh18Q8VHR0 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh18Q8VHR0 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh18Q8VHR0 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh18Q8VHR0 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh18Q8VHR0 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh18Q8VHR0 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh18Q8VHR0 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh18Q8VHR0 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Pcdh18Q8VHR0 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.53□□□□□ -0.08
Pcdh18Q8VHR0 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh18Q8VHR0 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh18Q8VHR0 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.53□□□□□ -0.08
Pcdh18Q8VHR0 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh18Q8VHR0 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh18Q8VHR0 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh18Q8VHR0 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh18Q8VHR0 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.53□□□□□ -0.08
Pcdh18Q8VHR0 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh18Q8VHR0 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh18Q8VHR0 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.53□□□□□ -0.08
Pcdh18Q8VHR0 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh18Q8VHR0 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh18Q8VHR0 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh18Q8VHR0 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh18Q8VHR0 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh18Q8VHR0 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh18Q8VHR0 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh18Q8VHR0 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Pcdh18Q8VHR0 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.52□□□□□ -0.08
Pcdh18Q8VHR0 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh18Q8VHR0 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh18Q8VHR0 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh18Q8VHR0 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.52□□□□□ -0.08
Pcdh18Q8VHR0 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh18Q8VHR0 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Pcdh18Q8VHR0 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh18Q8VHR0 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh18Q8VHR0 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Pcdh18Q8VHR0 Gm6257-201ENSMUST00000163864 910 ntBASIC14.52□□□□□ -0.09
Pcdh18Q8VHR0 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms