Protein–RNA interactions for Protein: Q8R2T8

Gtf3c5, General transcription factor 3C polypeptide 5, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c5Q8R2T8 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gtf3c5Q8R2T8 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gtf3c5Q8R2T8 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gtf3c5Q8R2T8 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gtf3c5Q8R2T8 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Gtf3c5Q8R2T8 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gtf3c5Q8R2T8 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gtf3c5Q8R2T8 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Gtf3c5Q8R2T8 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.71■□□□□ 0.43
Gtf3c5Q8R2T8 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gtf3c5Q8R2T8 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gtf3c5Q8R2T8 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gtf3c5Q8R2T8 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Gtf3c5Q8R2T8 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Gtf3c5Q8R2T8 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gtf3c5Q8R2T8 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Gtf3c5Q8R2T8 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Gtf3c5Q8R2T8 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gtf3c5Q8R2T8 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC17.71■□□□□ 0.43
Gtf3c5Q8R2T8 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gtf3c5Q8R2T8 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gtf3c5Q8R2T8 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gtf3c5Q8R2T8 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gtf3c5Q8R2T8 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC17.71■□□□□ 0.43
Gtf3c5Q8R2T8 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gtf3c5Q8R2T8 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Gtf3c5Q8R2T8 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Gtf3c5Q8R2T8 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gtf3c5Q8R2T8 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gtf3c5Q8R2T8 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gtf3c5Q8R2T8 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gtf3c5Q8R2T8 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gtf3c5Q8R2T8 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gtf3c5Q8R2T8 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gtf3c5Q8R2T8 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gtf3c5Q8R2T8 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gtf3c5Q8R2T8 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC17.7■□□□□ 0.42
Gtf3c5Q8R2T8 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gtf3c5Q8R2T8 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gtf3c5Q8R2T8 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gtf3c5Q8R2T8 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gtf3c5Q8R2T8 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gtf3c5Q8R2T8 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gtf3c5Q8R2T8 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.7■□□□□ 0.42
Gtf3c5Q8R2T8 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gtf3c5Q8R2T8 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gtf3c5Q8R2T8 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gtf3c5Q8R2T8 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gtf3c5Q8R2T8 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gtf3c5Q8R2T8 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.7■□□□□ 0.42
Gtf3c5Q8R2T8 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gtf3c5Q8R2T8 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gtf3c5Q8R2T8 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gtf3c5Q8R2T8 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gtf3c5Q8R2T8 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gtf3c5Q8R2T8 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.69■□□□□ 0.42
Gtf3c5Q8R2T8 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gtf3c5Q8R2T8 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gtf3c5Q8R2T8 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gtf3c5Q8R2T8 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Gtf3c5Q8R2T8 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gtf3c5Q8R2T8 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gtf3c5Q8R2T8 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gtf3c5Q8R2T8 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.69■□□□□ 0.42
Gtf3c5Q8R2T8 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.69■□□□□ 0.42
Gtf3c5Q8R2T8 Gm45167-201ENSMUST00000208007 322 ntBASIC17.69■□□□□ 0.42
Gtf3c5Q8R2T8 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gtf3c5Q8R2T8 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gtf3c5Q8R2T8 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gtf3c5Q8R2T8 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gtf3c5Q8R2T8 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gtf3c5Q8R2T8 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Gtf3c5Q8R2T8 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Gtf3c5Q8R2T8 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gtf3c5Q8R2T8 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gtf3c5Q8R2T8 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gtf3c5Q8R2T8 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gtf3c5Q8R2T8 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gtf3c5Q8R2T8 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gtf3c5Q8R2T8 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gtf3c5Q8R2T8 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gtf3c5Q8R2T8 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gtf3c5Q8R2T8 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gtf3c5Q8R2T8 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gtf3c5Q8R2T8 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gtf3c5Q8R2T8 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gtf3c5Q8R2T8 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.68■□□□□ 0.42
Gtf3c5Q8R2T8 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gtf3c5Q8R2T8 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gtf3c5Q8R2T8 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gtf3c5Q8R2T8 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.68■□□□□ 0.42
Gtf3c5Q8R2T8 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gtf3c5Q8R2T8 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Gtf3c5Q8R2T8 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gtf3c5Q8R2T8 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gtf3c5Q8R2T8 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gtf3c5Q8R2T8 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gtf3c5Q8R2T8 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.68■□□□□ 0.42
Gtf3c5Q8R2T8 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gtf3c5Q8R2T8 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms