Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Gm44344-201ENSMUST00000200287 129 ntBASIC17.69■□□□□ 0.42
Shtn1Q8K2Q9 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shtn1Q8K2Q9 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shtn1Q8K2Q9 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shtn1Q8K2Q9 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shtn1Q8K2Q9 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shtn1Q8K2Q9 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shtn1Q8K2Q9 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.69■□□□□ 0.42
Shtn1Q8K2Q9 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shtn1Q8K2Q9 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shtn1Q8K2Q9 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shtn1Q8K2Q9 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shtn1Q8K2Q9 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Shtn1Q8K2Q9 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Shtn1Q8K2Q9 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shtn1Q8K2Q9 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.68■□□□□ 0.42
Shtn1Q8K2Q9 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shtn1Q8K2Q9 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC17.68■□□□□ 0.42
Shtn1Q8K2Q9 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Shtn1Q8K2Q9 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shtn1Q8K2Q9 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC17.68■□□□□ 0.42
Shtn1Q8K2Q9 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Shtn1Q8K2Q9 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Shtn1Q8K2Q9 Gm27680-201ENSMUST00000184192 160 ntBASIC17.68■□□□□ 0.42
Shtn1Q8K2Q9 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.68■□□□□ 0.42
Shtn1Q8K2Q9 AL593843.1-201ENSMUST00000195891 145 ntBASIC17.68■□□□□ 0.42
Shtn1Q8K2Q9 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Shtn1Q8K2Q9 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shtn1Q8K2Q9 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shtn1Q8K2Q9 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shtn1Q8K2Q9 Gm3365-201ENSMUST00000216296 1480 ntBASIC17.68■□□□□ 0.42
Shtn1Q8K2Q9 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shtn1Q8K2Q9 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shtn1Q8K2Q9 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shtn1Q8K2Q9 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shtn1Q8K2Q9 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.68■□□□□ 0.42
Shtn1Q8K2Q9 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Shtn1Q8K2Q9 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.67■□□□□ 0.42
Shtn1Q8K2Q9 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Shtn1Q8K2Q9 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shtn1Q8K2Q9 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shtn1Q8K2Q9 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shtn1Q8K2Q9 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Shtn1Q8K2Q9 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shtn1Q8K2Q9 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shtn1Q8K2Q9 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Shtn1Q8K2Q9 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shtn1Q8K2Q9 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC17.67■□□□□ 0.42
Shtn1Q8K2Q9 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC17.67■□□□□ 0.42
Shtn1Q8K2Q9 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC17.67■□□□□ 0.42
Shtn1Q8K2Q9 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC17.67■□□□□ 0.42
Shtn1Q8K2Q9 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shtn1Q8K2Q9 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shtn1Q8K2Q9 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shtn1Q8K2Q9 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shtn1Q8K2Q9 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Shtn1Q8K2Q9 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shtn1Q8K2Q9 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shtn1Q8K2Q9 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shtn1Q8K2Q9 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.67■□□□□ 0.42
Shtn1Q8K2Q9 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC17.67■□□□□ 0.42
Shtn1Q8K2Q9 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.67■□□□□ 0.42
Shtn1Q8K2Q9 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shtn1Q8K2Q9 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shtn1Q8K2Q9 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Shtn1Q8K2Q9 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shtn1Q8K2Q9 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shtn1Q8K2Q9 Gm12859-201ENSMUST00000117834 427 ntBASIC17.66■□□□□ 0.42
Shtn1Q8K2Q9 Gm27838-201ENSMUST00000184829 128 ntBASIC17.66■□□□□ 0.42
Shtn1Q8K2Q9 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC17.66■□□□□ 0.42
Shtn1Q8K2Q9 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shtn1Q8K2Q9 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Shtn1Q8K2Q9 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Shtn1Q8K2Q9 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Shtn1Q8K2Q9 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shtn1Q8K2Q9 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shtn1Q8K2Q9 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shtn1Q8K2Q9 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.66■□□□□ 0.42
Shtn1Q8K2Q9 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Shtn1Q8K2Q9 Gm6263-201ENSMUST00000120029 1342 ntBASIC17.66■□□□□ 0.42
Shtn1Q8K2Q9 Gm15163-201ENSMUST00000120749 1302 ntBASIC17.66■□□□□ 0.42
Shtn1Q8K2Q9 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shtn1Q8K2Q9 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shtn1Q8K2Q9 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shtn1Q8K2Q9 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Shtn1Q8K2Q9 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Shtn1Q8K2Q9 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shtn1Q8K2Q9 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Shtn1Q8K2Q9 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Shtn1Q8K2Q9 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shtn1Q8K2Q9 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shtn1Q8K2Q9 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shtn1Q8K2Q9 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shtn1Q8K2Q9 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shtn1Q8K2Q9 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shtn1Q8K2Q9 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.65■□□□□ 0.42
Shtn1Q8K2Q9 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shtn1Q8K2Q9 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Shtn1Q8K2Q9 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shtn1Q8K2Q9 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms