Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rtn1Q8K0T0 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.35■□□□□ 0.37
Rtn1Q8K0T0 Gm12260-201ENSMUST00000122447 411 ntBASIC17.35■□□□□ 0.37
Rtn1Q8K0T0 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rtn1Q8K0T0 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC17.35■□□□□ 0.37
Rtn1Q8K0T0 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.35■□□□□ 0.37
Rtn1Q8K0T0 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rtn1Q8K0T0 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rtn1Q8K0T0 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.35■□□□□ 0.37
Rtn1Q8K0T0 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rtn1Q8K0T0 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.35■□□□□ 0.37
Rtn1Q8K0T0 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Rtn1Q8K0T0 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.35■□□□□ 0.37
Rtn1Q8K0T0 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Rtn1Q8K0T0 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rtn1Q8K0T0 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rtn1Q8K0T0 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rtn1Q8K0T0 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rtn1Q8K0T0 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rtn1Q8K0T0 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Rtn1Q8K0T0 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rtn1Q8K0T0 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
Rtn1Q8K0T0 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.34■□□□□ 0.37
Rtn1Q8K0T0 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rtn1Q8K0T0 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rtn1Q8K0T0 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rtn1Q8K0T0 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Rtn1Q8K0T0 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.34■□□□□ 0.37
Rtn1Q8K0T0 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Rtn1Q8K0T0 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
Rtn1Q8K0T0 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rtn1Q8K0T0 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Rtn1Q8K0T0 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rtn1Q8K0T0 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rtn1Q8K0T0 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rtn1Q8K0T0 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.34■□□□□ 0.37
Rtn1Q8K0T0 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Rtn1Q8K0T0 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rtn1Q8K0T0 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Rtn1Q8K0T0 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rtn1Q8K0T0 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rtn1Q8K0T0 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.34■□□□□ 0.37
Rtn1Q8K0T0 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rtn1Q8K0T0 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rtn1Q8K0T0 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rtn1Q8K0T0 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
Rtn1Q8K0T0 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rtn1Q8K0T0 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rtn1Q8K0T0 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rtn1Q8K0T0 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rtn1Q8K0T0 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rtn1Q8K0T0 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rtn1Q8K0T0 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.33■□□□□ 0.36
Rtn1Q8K0T0 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rtn1Q8K0T0 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Rtn1Q8K0T0 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.33■□□□□ 0.36
Rtn1Q8K0T0 Gm5177-201ENSMUST00000183092 997 ntBASIC17.33■□□□□ 0.36
Rtn1Q8K0T0 Gm27525-201ENSMUST00000184465 107 ntBASIC17.33■□□□□ 0.36
Rtn1Q8K0T0 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.33■□□□□ 0.36
Rtn1Q8K0T0 Gm19891-201ENSMUST00000189771 303 ntBASIC17.33■□□□□ 0.36
Rtn1Q8K0T0 Gm6443-201ENSMUST00000203599 874 ntBASIC17.33■□□□□ 0.36
Rtn1Q8K0T0 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Rtn1Q8K0T0 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Rtn1Q8K0T0 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rtn1Q8K0T0 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Rtn1Q8K0T0 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rtn1Q8K0T0 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rtn1Q8K0T0 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rtn1Q8K0T0 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.33■□□□□ 0.36
Rtn1Q8K0T0 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rtn1Q8K0T0 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rtn1Q8K0T0 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rtn1Q8K0T0 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rtn1Q8K0T0 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rtn1Q8K0T0 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn1Q8K0T0 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn1Q8K0T0 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn1Q8K0T0 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Rtn1Q8K0T0 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn1Q8K0T0 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn1Q8K0T0 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn1Q8K0T0 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn1Q8K0T0 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rtn1Q8K0T0 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn1Q8K0T0 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn1Q8K0T0 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Rtn1Q8K0T0 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn1Q8K0T0 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn1Q8K0T0 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC17.32■□□□□ 0.36
Rtn1Q8K0T0 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.32■□□□□ 0.36
Rtn1Q8K0T0 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn1Q8K0T0 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn1Q8K0T0 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn1Q8K0T0 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Rtn1Q8K0T0 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn1Q8K0T0 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn1Q8K0T0 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn1Q8K0T0 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn1Q8K0T0 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn1Q8K0T0 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms