Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Syne4Q8CII8 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Syne4Q8CII8 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Syne4Q8CII8 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Syne4Q8CII8 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Syne4Q8CII8 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
Syne4Q8CII8 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Syne4Q8CII8 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Syne4Q8CII8 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.93■□□□□ 0.3
Syne4Q8CII8 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Syne4Q8CII8 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Syne4Q8CII8 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Syne4Q8CII8 Gm6912-201ENSMUST00000117218 544 ntBASIC16.93■□□□□ 0.3
Syne4Q8CII8 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Syne4Q8CII8 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Syne4Q8CII8 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.93■□□□□ 0.3
Syne4Q8CII8 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.93■□□□□ 0.3
Syne4Q8CII8 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Syne4Q8CII8 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Syne4Q8CII8 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Syne4Q8CII8 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Syne4Q8CII8 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.93■□□□□ 0.3
Syne4Q8CII8 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Syne4Q8CII8 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Syne4Q8CII8 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Syne4Q8CII8 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Syne4Q8CII8 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Syne4Q8CII8 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Syne4Q8CII8 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.93■□□□□ 0.3
Syne4Q8CII8 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Syne4Q8CII8 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Syne4Q8CII8 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Syne4Q8CII8 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Syne4Q8CII8 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Syne4Q8CII8 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Syne4Q8CII8 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Syne4Q8CII8 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC16.92■□□□□ 0.3
Syne4Q8CII8 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Syne4Q8CII8 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Syne4Q8CII8 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Syne4Q8CII8 Gm11478-201ENSMUST00000117851 599 ntBASIC16.92■□□□□ 0.3
Syne4Q8CII8 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC16.92■□□□□ 0.3
Syne4Q8CII8 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC16.92■□□□□ 0.3
Syne4Q8CII8 Ighv5-13-201ENSMUST00000193550 290 ntBASIC16.92■□□□□ 0.3
Syne4Q8CII8 Gm45195-201ENSMUST00000205597 1008 ntBASIC16.92■□□□□ 0.3
Syne4Q8CII8 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Syne4Q8CII8 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Syne4Q8CII8 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Syne4Q8CII8 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Syne4Q8CII8 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Syne4Q8CII8 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
Syne4Q8CII8 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Syne4Q8CII8 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Syne4Q8CII8 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Syne4Q8CII8 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Syne4Q8CII8 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Syne4Q8CII8 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Syne4Q8CII8 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Syne4Q8CII8 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Syne4Q8CII8 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Syne4Q8CII8 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.91■□□□□ 0.3
Syne4Q8CII8 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Syne4Q8CII8 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Syne4Q8CII8 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Syne4Q8CII8 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Syne4Q8CII8 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Syne4Q8CII8 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC16.91■□□□□ 0.3
Syne4Q8CII8 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.91■□□□□ 0.3
Syne4Q8CII8 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Syne4Q8CII8 Gm12138-201ENSMUST00000122180 951 ntBASIC16.91■□□□□ 0.3
Syne4Q8CII8 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC16.91■□□□□ 0.3
Syne4Q8CII8 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Syne4Q8CII8 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Syne4Q8CII8 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Syne4Q8CII8 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC16.91■□□□□ 0.3
Syne4Q8CII8 Gm42612-201ENSMUST00000197986 623 ntBASIC16.91■□□□□ 0.3
Syne4Q8CII8 Gm43170-201ENSMUST00000199827 612 ntBASIC16.91■□□□□ 0.3
Syne4Q8CII8 Gm43703-201ENSMUST00000200523 763 ntBASIC16.91■□□□□ 0.3
Syne4Q8CII8 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Syne4Q8CII8 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Syne4Q8CII8 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Syne4Q8CII8 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Syne4Q8CII8 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Syne4Q8CII8 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Syne4Q8CII8 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC16.91■□□□□ 0.3
Syne4Q8CII8 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Syne4Q8CII8 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Syne4Q8CII8 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Syne4Q8CII8 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Syne4Q8CII8 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Syne4Q8CII8 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Syne4Q8CII8 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Syne4Q8CII8 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Syne4Q8CII8 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Syne4Q8CII8 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Syne4Q8CII8 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Syne4Q8CII8 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Syne4Q8CII8 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Syne4Q8CII8 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Syne4Q8CII8 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms