Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rp1l1Q8CGM2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rp1l1Q8CGM2 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rp1l1Q8CGM2 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rp1l1Q8CGM2 Gm8463-201ENSMUST00000208573 613 ntBASIC15.4■□□□□ 0.06
Rp1l1Q8CGM2 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC15.4■□□□□ 0.06
Rp1l1Q8CGM2 AC139580.1-202ENSMUST00000223574 928 ntBASIC15.4■□□□□ 0.06
Rp1l1Q8CGM2 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Rp1l1Q8CGM2 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rp1l1Q8CGM2 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rp1l1Q8CGM2 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rp1l1Q8CGM2 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rp1l1Q8CGM2 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rp1l1Q8CGM2 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rp1l1Q8CGM2 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.4■□□□□ 0.06
Rp1l1Q8CGM2 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Rp1l1Q8CGM2 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rp1l1Q8CGM2 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Rp1l1Q8CGM2 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rp1l1Q8CGM2 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rp1l1Q8CGM2 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC15.4■□□□□ 0.06
Rp1l1Q8CGM2 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rp1l1Q8CGM2 AC154846.1-201ENSMUST00000226278 862 ntBASIC15.4■□□□□ 0.06
Rp1l1Q8CGM2 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Rp1l1Q8CGM2 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rp1l1Q8CGM2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC15.39■□□□□ 0.05
Rp1l1Q8CGM2 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rp1l1Q8CGM2 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Rp1l1Q8CGM2 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rp1l1Q8CGM2 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
Rp1l1Q8CGM2 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Rp1l1Q8CGM2 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rp1l1Q8CGM2 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC15.39■□□□□ 0.05
Rp1l1Q8CGM2 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rp1l1Q8CGM2 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rp1l1Q8CGM2 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.39■□□□□ 0.05
Rp1l1Q8CGM2 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rp1l1Q8CGM2 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rp1l1Q8CGM2 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Rp1l1Q8CGM2 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rp1l1Q8CGM2 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rp1l1Q8CGM2 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rp1l1Q8CGM2 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rp1l1Q8CGM2 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rp1l1Q8CGM2 AC114008.2-201ENSMUST00000227699 1347 ntBASIC15.38■□□□□ 0.05
Rp1l1Q8CGM2 Dancr-204ENSMUST00000132389 2347 ntBASIC15.38■□□□□ 0.05
Rp1l1Q8CGM2 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rp1l1Q8CGM2 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rp1l1Q8CGM2 Gm12742-201ENSMUST00000117326 410 ntBASIC15.38■□□□□ 0.05
Rp1l1Q8CGM2 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC15.38■□□□□ 0.05
Rp1l1Q8CGM2 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Rp1l1Q8CGM2 AC121804.3-201ENSMUST00000223420 295 ntBASIC15.38■□□□□ 0.05
Rp1l1Q8CGM2 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rp1l1Q8CGM2 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rp1l1Q8CGM2 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.38■□□□□ 0.05
Rp1l1Q8CGM2 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rp1l1Q8CGM2 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rp1l1Q8CGM2 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rp1l1Q8CGM2 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rp1l1Q8CGM2 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Rp1l1Q8CGM2 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rp1l1Q8CGM2 Gm14452-201ENSMUST00000118680 1632 ntBASIC15.38■□□□□ 0.05
Rp1l1Q8CGM2 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rp1l1Q8CGM2 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC15.37■□□□□ 0.05
Rp1l1Q8CGM2 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rp1l1Q8CGM2 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC15.37■□□□□ 0.05
Rp1l1Q8CGM2 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rp1l1Q8CGM2 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rp1l1Q8CGM2 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rp1l1Q8CGM2 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rp1l1Q8CGM2 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rp1l1Q8CGM2 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Rp1l1Q8CGM2 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rp1l1Q8CGM2 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rp1l1Q8CGM2 Mir692-1-201ENSMUST00000102263 109 ntBASIC15.37■□□□□ 0.05
Rp1l1Q8CGM2 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC15.37■□□□□ 0.05
Rp1l1Q8CGM2 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC15.37■□□□□ 0.05
Rp1l1Q8CGM2 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.37■□□□□ 0.05
Rp1l1Q8CGM2 Gm27839-201ENSMUST00000184242 106 ntBASIC15.37■□□□□ 0.05
Rp1l1Q8CGM2 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC15.37■□□□□ 0.05
Rp1l1Q8CGM2 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rp1l1Q8CGM2 AC121598.1-201ENSMUST00000228224 1019 ntBASIC15.37■□□□□ 0.05
Rp1l1Q8CGM2 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rp1l1Q8CGM2 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rp1l1Q8CGM2 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Rp1l1Q8CGM2 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rp1l1Q8CGM2 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rp1l1Q8CGM2 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rp1l1Q8CGM2 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rp1l1Q8CGM2 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rp1l1Q8CGM2 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.36■□□□□ 0.05
Rp1l1Q8CGM2 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Rp1l1Q8CGM2 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rp1l1Q8CGM2 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rp1l1Q8CGM2 Gm14660-201ENSMUST00000119809 575 ntBASIC15.36■□□□□ 0.05
Rp1l1Q8CGM2 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Rp1l1Q8CGM2 Gm6244-201ENSMUST00000178732 841 ntBASIC15.36■□□□□ 0.05
Rp1l1Q8CGM2 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC15.36■□□□□ 0.05
Rp1l1Q8CGM2 Gm9257-201ENSMUST00000221254 232 ntBASIC15.36■□□□□ 0.05
Rp1l1Q8CGM2 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms