Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Rbm28Q8CGC6 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rbm28Q8CGC6 Gm7901-201ENSMUST00000120430 1597 ntBASIC17.78■□□□□ 0.44
Rbm28Q8CGC6 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rbm28Q8CGC6 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rbm28Q8CGC6 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rbm28Q8CGC6 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Rbm28Q8CGC6 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rbm28Q8CGC6 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rbm28Q8CGC6 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rbm28Q8CGC6 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rbm28Q8CGC6 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Rbm28Q8CGC6 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rbm28Q8CGC6 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rbm28Q8CGC6 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rbm28Q8CGC6 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rbm28Q8CGC6 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rbm28Q8CGC6 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rbm28Q8CGC6 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.77■□□□□ 0.44
Rbm28Q8CGC6 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17.77■□□□□ 0.44
Rbm28Q8CGC6 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.77■□□□□ 0.44
Rbm28Q8CGC6 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Rbm28Q8CGC6 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.77■□□□□ 0.44
Rbm28Q8CGC6 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rbm28Q8CGC6 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rbm28Q8CGC6 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rbm28Q8CGC6 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rbm28Q8CGC6 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rbm28Q8CGC6 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rbm28Q8CGC6 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Rbm28Q8CGC6 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rbm28Q8CGC6 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.77■□□□□ 0.44
Rbm28Q8CGC6 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Rbm28Q8CGC6 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rbm28Q8CGC6 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rbm28Q8CGC6 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rbm28Q8CGC6 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rbm28Q8CGC6 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rbm28Q8CGC6 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rbm28Q8CGC6 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rbm28Q8CGC6 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rbm28Q8CGC6 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.76■□□□□ 0.43
Rbm28Q8CGC6 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rbm28Q8CGC6 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rbm28Q8CGC6 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
Rbm28Q8CGC6 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rbm28Q8CGC6 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rbm28Q8CGC6 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rbm28Q8CGC6 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rbm28Q8CGC6 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rbm28Q8CGC6 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rbm28Q8CGC6 Gm15920-201ENSMUST00000118998 402 ntBASIC17.76■□□□□ 0.43
Rbm28Q8CGC6 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rbm28Q8CGC6 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rbm28Q8CGC6 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rbm28Q8CGC6 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rbm28Q8CGC6 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rbm28Q8CGC6 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rbm28Q8CGC6 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rbm28Q8CGC6 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.76■□□□□ 0.43
Rbm28Q8CGC6 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rbm28Q8CGC6 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rbm28Q8CGC6 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rbm28Q8CGC6 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rbm28Q8CGC6 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Rbm28Q8CGC6 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rbm28Q8CGC6 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rbm28Q8CGC6 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rbm28Q8CGC6 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rbm28Q8CGC6 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rbm28Q8CGC6 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rbm28Q8CGC6 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rbm28Q8CGC6 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Rbm28Q8CGC6 Gm13365-201ENSMUST00000121188 973 ntBASIC17.75■□□□□ 0.43
Rbm28Q8CGC6 Gm11745-201ENSMUST00000121669 448 ntBASIC17.75■□□□□ 0.43
Rbm28Q8CGC6 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rbm28Q8CGC6 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Rbm28Q8CGC6 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Rbm28Q8CGC6 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Rbm28Q8CGC6 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rbm28Q8CGC6 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rbm28Q8CGC6 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rbm28Q8CGC6 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC17.75■□□□□ 0.43
Rbm28Q8CGC6 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Rbm28Q8CGC6 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rbm28Q8CGC6 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.75■□□□□ 0.43
Rbm28Q8CGC6 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rbm28Q8CGC6 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rbm28Q8CGC6 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rbm28Q8CGC6 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rbm28Q8CGC6 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rbm28Q8CGC6 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rbm28Q8CGC6 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rbm28Q8CGC6 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rbm28Q8CGC6 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rbm28Q8CGC6 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.74■□□□□ 0.43
Rbm28Q8CGC6 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rbm28Q8CGC6 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rbm28Q8CGC6 Gm16198-201ENSMUST00000118766 670 ntBASIC17.74■□□□□ 0.43
Rbm28Q8CGC6 Rpph1-201ENSMUST00000175096 319 ntBASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms