Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc4Q8CG47 Gm14026-201ENSMUST00000120625 1789 ntBASIC18.5■□□□□ 0.55
Smc4Q8CG47 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc4Q8CG47 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc4Q8CG47 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC18.49■□□□□ 0.55
Smc4Q8CG47 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc4Q8CG47 Gm13233-201ENSMUST00000118760 1443 ntBASIC18.49■□□□□ 0.55
Smc4Q8CG47 Gm13244-201ENSMUST00000118855 1446 ntBASIC18.49■□□□□ 0.55
Smc4Q8CG47 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC18.49■□□□□ 0.55
Smc4Q8CG47 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc4Q8CG47 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smc4Q8CG47 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc4Q8CG47 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smc4Q8CG47 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc4Q8CG47 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC18.49■□□□□ 0.55
Smc4Q8CG47 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC18.49■□□□□ 0.55
Smc4Q8CG47 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smc4Q8CG47 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smc4Q8CG47 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Smc4Q8CG47 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC18.49■□□□□ 0.55
Smc4Q8CG47 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC18.49■□□□□ 0.55
Smc4Q8CG47 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc4Q8CG47 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Smc4Q8CG47 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC18.49■□□□□ 0.55
Smc4Q8CG47 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc4Q8CG47 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc4Q8CG47 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc4Q8CG47 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc4Q8CG47 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smc4Q8CG47 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC18.49■□□□□ 0.55
Smc4Q8CG47 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc4Q8CG47 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc4Q8CG47 Gm6018-201ENSMUST00000216090 1306 ntBASIC18.49■□□□□ 0.55
Smc4Q8CG47 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smc4Q8CG47 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
Smc4Q8CG47 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smc4Q8CG47 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smc4Q8CG47 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smc4Q8CG47 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smc4Q8CG47 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC18.48■□□□□ 0.55
Smc4Q8CG47 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Smc4Q8CG47 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Smc4Q8CG47 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smc4Q8CG47 AC131710.1-201ENSMUST00000228336 990 ntBASIC18.48■□□□□ 0.55
Smc4Q8CG47 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC18.48■□□□□ 0.55
Smc4Q8CG47 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smc4Q8CG47 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smc4Q8CG47 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smc4Q8CG47 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smc4Q8CG47 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smc4Q8CG47 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
Smc4Q8CG47 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smc4Q8CG47 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smc4Q8CG47 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smc4Q8CG47 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Smc4Q8CG47 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smc4Q8CG47 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smc4Q8CG47 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smc4Q8CG47 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smc4Q8CG47 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC18.47■□□□□ 0.55
Smc4Q8CG47 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc4Q8CG47 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc4Q8CG47 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc4Q8CG47 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc4Q8CG47 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Smc4Q8CG47 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc4Q8CG47 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc4Q8CG47 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.47■□□□□ 0.55
Smc4Q8CG47 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC18.47■□□□□ 0.55
Smc4Q8CG47 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC18.47■□□□□ 0.55
Smc4Q8CG47 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Smc4Q8CG47 Gm44872-201ENSMUST00000207864 420 ntBASIC18.47■□□□□ 0.55
Smc4Q8CG47 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc4Q8CG47 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Smc4Q8CG47 Mxra8os-201ENSMUST00000097740 687 ntBASIC18.47■□□□□ 0.55
Smc4Q8CG47 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC18.47■□□□□ 0.55
Smc4Q8CG47 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Smc4Q8CG47 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc4Q8CG47 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC18.47■□□□□ 0.55
Smc4Q8CG47 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc4Q8CG47 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc4Q8CG47 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc4Q8CG47 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc4Q8CG47 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc4Q8CG47 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Smc4Q8CG47 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Smc4Q8CG47 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smc4Q8CG47 Gm42901-201ENSMUST00000197735 3171 ntBASIC18.46■□□□□ 0.55
Smc4Q8CG47 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Smc4Q8CG47 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smc4Q8CG47 Gm37812-201ENSMUST00000195216 2475 ntBASIC18.46■□□□□ 0.55
Smc4Q8CG47 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smc4Q8CG47 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smc4Q8CG47 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smc4Q8CG47 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smc4Q8CG47 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smc4Q8CG47 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Smc4Q8CG47 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC18.46■□□□□ 0.55
Smc4Q8CG47 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC18.46■□□□□ 0.55
Smc4Q8CG47 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms