Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Lysmd4Q8CC84 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd4Q8CC84 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd4Q8CC84 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Lysmd4Q8CC84 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd4Q8CC84 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd4Q8CC84 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Lysmd4Q8CC84 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd4Q8CC84 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd4Q8CC84 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd4Q8CC84 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd4Q8CC84 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd4Q8CC84 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd4Q8CC84 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd4Q8CC84 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd4Q8CC84 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Lysmd4Q8CC84 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd4Q8CC84 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd4Q8CC84 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd4Q8CC84 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd4Q8CC84 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.51□□□□□ -0.25
Lysmd4Q8CC84 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd4Q8CC84 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd4Q8CC84 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd4Q8CC84 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd4Q8CC84 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd4Q8CC84 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.5□□□□□ -0.25
Lysmd4Q8CC84 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd4Q8CC84 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd4Q8CC84 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd4Q8CC84 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd4Q8CC84 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd4Q8CC84 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd4Q8CC84 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd4Q8CC84 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd4Q8CC84 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd4Q8CC84 Gm8258-201ENSMUST00000055593 1449 ntBASIC13.5□□□□□ -0.25
Lysmd4Q8CC84 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Lysmd4Q8CC84 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd4Q8CC84 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd4Q8CC84 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Lysmd4Q8CC84 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd4Q8CC84 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd4Q8CC84 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd4Q8CC84 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Lysmd4Q8CC84 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd4Q8CC84 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Lysmd4Q8CC84 Gm17808-201ENSMUST00000200859 894 ntBASIC13.5□□□□□ -0.25
Lysmd4Q8CC84 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.5□□□□□ -0.25
Lysmd4Q8CC84 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd4Q8CC84 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Lysmd4Q8CC84 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd4Q8CC84 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Lysmd4Q8CC84 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd4Q8CC84 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd4Q8CC84 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd4Q8CC84 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd4Q8CC84 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd4Q8CC84 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd4Q8CC84 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lysmd4Q8CC84 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.5□□□□□ -0.25
Lysmd4Q8CC84 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Lysmd4Q8CC84 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lysmd4Q8CC84 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lysmd4Q8CC84 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lysmd4Q8CC84 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lysmd4Q8CC84 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lysmd4Q8CC84 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Lysmd4Q8CC84 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lysmd4Q8CC84 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Lysmd4Q8CC84 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC13.49□□□□□ -0.25
Lysmd4Q8CC84 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.49□□□□□ -0.25
Lysmd4Q8CC84 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lysmd4Q8CC84 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lysmd4Q8CC84 AA414768-201ENSMUST00000121924 1257 ntBASIC13.49□□□□□ -0.25
Lysmd4Q8CC84 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Lysmd4Q8CC84 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lysmd4Q8CC84 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.49□□□□□ -0.25
Lysmd4Q8CC84 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lysmd4Q8CC84 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.49□□□□□ -0.25
Lysmd4Q8CC84 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Lysmd4Q8CC84 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lysmd4Q8CC84 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.49□□□□□ -0.25
Lysmd4Q8CC84 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lysmd4Q8CC84 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lysmd4Q8CC84 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lysmd4Q8CC84 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lysmd4Q8CC84 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lysmd4Q8CC84 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lysmd4Q8CC84 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.49□□□□□ -0.25
Lysmd4Q8CC84 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.48□□□□□ -0.25
Lysmd4Q8CC84 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.48□□□□□ -0.25
Lysmd4Q8CC84 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Lysmd4Q8CC84 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lysmd4Q8CC84 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lysmd4Q8CC84 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lysmd4Q8CC84 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lysmd4Q8CC84 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lysmd4Q8CC84 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Lysmd4Q8CC84 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms