Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Shisa4Q8CA71 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Shisa4Q8CA71 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC17.41■□□□□ 0.38
Shisa4Q8CA71 Klk2-ps-201ENSMUST00000205342 571 ntBASIC17.41■□□□□ 0.38
Shisa4Q8CA71 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC17.41■□□□□ 0.38
Shisa4Q8CA71 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shisa4Q8CA71 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Shisa4Q8CA71 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.41■□□□□ 0.38
Shisa4Q8CA71 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Shisa4Q8CA71 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Shisa4Q8CA71 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shisa4Q8CA71 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Shisa4Q8CA71 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Shisa4Q8CA71 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Shisa4Q8CA71 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.41■□□□□ 0.38
Shisa4Q8CA71 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Shisa4Q8CA71 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shisa4Q8CA71 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shisa4Q8CA71 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Shisa4Q8CA71 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shisa4Q8CA71 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shisa4Q8CA71 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shisa4Q8CA71 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa4Q8CA71 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa4Q8CA71 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa4Q8CA71 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Shisa4Q8CA71 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa4Q8CA71 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa4Q8CA71 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa4Q8CA71 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa4Q8CA71 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa4Q8CA71 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa4Q8CA71 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.4■□□□□ 0.38
Shisa4Q8CA71 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa4Q8CA71 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC17.4■□□□□ 0.38
Shisa4Q8CA71 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa4Q8CA71 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa4Q8CA71 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.4■□□□□ 0.38
Shisa4Q8CA71 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa4Q8CA71 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.4■□□□□ 0.38
Shisa4Q8CA71 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17.4■□□□□ 0.38
Shisa4Q8CA71 Gm27494-201ENSMUST00000184735 189 ntBASIC17.4■□□□□ 0.38
Shisa4Q8CA71 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC17.4■□□□□ 0.38
Shisa4Q8CA71 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa4Q8CA71 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa4Q8CA71 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa4Q8CA71 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC17.4■□□□□ 0.38
Shisa4Q8CA71 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC17.4■□□□□ 0.38
Shisa4Q8CA71 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa4Q8CA71 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa4Q8CA71 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Shisa4Q8CA71 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa4Q8CA71 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa4Q8CA71 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Shisa4Q8CA71 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Shisa4Q8CA71 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.39■□□□□ 0.38
Shisa4Q8CA71 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.39■□□□□ 0.38
Shisa4Q8CA71 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shisa4Q8CA71 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shisa4Q8CA71 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shisa4Q8CA71 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shisa4Q8CA71 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shisa4Q8CA71 Gm13464-201ENSMUST00000119418 935 ntBASIC17.39■□□□□ 0.37
Shisa4Q8CA71 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Shisa4Q8CA71 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.39■□□□□ 0.37
Shisa4Q8CA71 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC17.39■□□□□ 0.37
Shisa4Q8CA71 AC139382.1-201ENSMUST00000221402 498 ntBASIC17.39■□□□□ 0.37
Shisa4Q8CA71 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.39■□□□□ 0.37
Shisa4Q8CA71 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shisa4Q8CA71 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Shisa4Q8CA71 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Shisa4Q8CA71 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shisa4Q8CA71 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shisa4Q8CA71 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shisa4Q8CA71 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shisa4Q8CA71 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shisa4Q8CA71 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Shisa4Q8CA71 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Shisa4Q8CA71 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shisa4Q8CA71 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shisa4Q8CA71 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shisa4Q8CA71 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shisa4Q8CA71 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.38■□□□□ 0.37
Shisa4Q8CA71 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Shisa4Q8CA71 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shisa4Q8CA71 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Shisa4Q8CA71 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shisa4Q8CA71 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.38■□□□□ 0.37
Shisa4Q8CA71 Gm8749-201ENSMUST00000117737 331 ntBASIC17.38■□□□□ 0.37
Shisa4Q8CA71 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Shisa4Q8CA71 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.38■□□□□ 0.37
Shisa4Q8CA71 Gm2451-201ENSMUST00000199447 999 ntBASIC17.38■□□□□ 0.37
Shisa4Q8CA71 Gm10290-201ENSMUST00000200451 999 ntBASIC17.38■□□□□ 0.37
Shisa4Q8CA71 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Shisa4Q8CA71 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.38■□□□□ 0.37
Shisa4Q8CA71 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shisa4Q8CA71 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shisa4Q8CA71 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shisa4Q8CA71 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shisa4Q8CA71 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms