Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Alx1Q8C8B0 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.53■□□□□ 0.4
Alx1Q8C8B0 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Alx1Q8C8B0 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Alx1Q8C8B0 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.52■□□□□ 0.4
Alx1Q8C8B0 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Alx1Q8C8B0 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Alx1Q8C8B0 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Alx1Q8C8B0 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Alx1Q8C8B0 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.52■□□□□ 0.4
Alx1Q8C8B0 Gm13464-201ENSMUST00000119418 935 ntBASIC17.52■□□□□ 0.4
Alx1Q8C8B0 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.52■□□□□ 0.4
Alx1Q8C8B0 Gm13365-201ENSMUST00000121188 973 ntBASIC17.52■□□□□ 0.4
Alx1Q8C8B0 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Alx1Q8C8B0 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Alx1Q8C8B0 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC17.52■□□□□ 0.4
Alx1Q8C8B0 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.52■□□□□ 0.4
Alx1Q8C8B0 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.52■□□□□ 0.4
Alx1Q8C8B0 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.52■□□□□ 0.4
Alx1Q8C8B0 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.52■□□□□ 0.4
Alx1Q8C8B0 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Alx1Q8C8B0 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.52■□□□□ 0.4
Alx1Q8C8B0 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.52■□□□□ 0.4
Alx1Q8C8B0 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Alx1Q8C8B0 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Alx1Q8C8B0 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Alx1Q8C8B0 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Alx1Q8C8B0 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Alx1Q8C8B0 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Alx1Q8C8B0 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Alx1Q8C8B0 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Alx1Q8C8B0 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Alx1Q8C8B0 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Alx1Q8C8B0 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Alx1Q8C8B0 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Alx1Q8C8B0 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.51■□□□□ 0.39
Alx1Q8C8B0 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Alx1Q8C8B0 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
Alx1Q8C8B0 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Alx1Q8C8B0 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.51■□□□□ 0.39
Alx1Q8C8B0 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Alx1Q8C8B0 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Alx1Q8C8B0 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.51■□□□□ 0.39
Alx1Q8C8B0 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Alx1Q8C8B0 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Alx1Q8C8B0 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Alx1Q8C8B0 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Alx1Q8C8B0 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Alx1Q8C8B0 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.51■□□□□ 0.39
Alx1Q8C8B0 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Alx1Q8C8B0 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Alx1Q8C8B0 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Alx1Q8C8B0 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Alx1Q8C8B0 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Alx1Q8C8B0 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Alx1Q8C8B0 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Alx1Q8C8B0 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Alx1Q8C8B0 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Alx1Q8C8B0 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Alx1Q8C8B0 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Alx1Q8C8B0 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Alx1Q8C8B0 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Alx1Q8C8B0 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Alx1Q8C8B0 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Alx1Q8C8B0 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.5■□□□□ 0.39
Alx1Q8C8B0 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Alx1Q8C8B0 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Alx1Q8C8B0 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Alx1Q8C8B0 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Alx1Q8C8B0 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Alx1Q8C8B0 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.5■□□□□ 0.39
Alx1Q8C8B0 Rprl2-201ENSMUST00000157150 290 ntBASIC17.5■□□□□ 0.39
Alx1Q8C8B0 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Alx1Q8C8B0 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.5■□□□□ 0.39
Alx1Q8C8B0 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Alx1Q8C8B0 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Alx1Q8C8B0 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Alx1Q8C8B0 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Alx1Q8C8B0 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.5■□□□□ 0.39
Alx1Q8C8B0 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
Alx1Q8C8B0 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.5■□□□□ 0.39
Alx1Q8C8B0 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Alx1Q8C8B0 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Alx1Q8C8B0 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Alx1Q8C8B0 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Alx1Q8C8B0 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Alx1Q8C8B0 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Alx1Q8C8B0 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Alx1Q8C8B0 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Alx1Q8C8B0 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Alx1Q8C8B0 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Alx1Q8C8B0 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Alx1Q8C8B0 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Alx1Q8C8B0 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Alx1Q8C8B0 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Alx1Q8C8B0 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Alx1Q8C8B0 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.49■□□□□ 0.39
Alx1Q8C8B0 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Alx1Q8C8B0 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC17.49■□□□□ 0.39
Alx1Q8C8B0 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms