Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.59■□□□□ 0.25
Trim9Q8C7M3 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim9Q8C7M3 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.59■□□□□ 0.25
Trim9Q8C7M3 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim9Q8C7M3 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim9Q8C7M3 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim9Q8C7M3 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim9Q8C7M3 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim9Q8C7M3 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.59■□□□□ 0.25
Trim9Q8C7M3 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim9Q8C7M3 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim9Q8C7M3 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Trim9Q8C7M3 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim9Q8C7M3 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim9Q8C7M3 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Trim9Q8C7M3 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Trim9Q8C7M3 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.58■□□□□ 0.24
Trim9Q8C7M3 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim9Q8C7M3 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.58■□□□□ 0.24
Trim9Q8C7M3 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim9Q8C7M3 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim9Q8C7M3 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim9Q8C7M3 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim9Q8C7M3 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim9Q8C7M3 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim9Q8C7M3 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.58■□□□□ 0.24
Trim9Q8C7M3 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.57■□□□□ 0.24
Trim9Q8C7M3 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim9Q8C7M3 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim9Q8C7M3 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim9Q8C7M3 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim9Q8C7M3 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim9Q8C7M3 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim9Q8C7M3 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Trim9Q8C7M3 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim9Q8C7M3 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim9Q8C7M3 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim9Q8C7M3 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim9Q8C7M3 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim9Q8C7M3 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.57■□□□□ 0.24
Trim9Q8C7M3 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.57■□□□□ 0.24
Trim9Q8C7M3 Gm18733-201ENSMUST00000173950 856 ntBASIC16.57■□□□□ 0.24
Trim9Q8C7M3 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim9Q8C7M3 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.57■□□□□ 0.24
Trim9Q8C7M3 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.57■□□□□ 0.24
Trim9Q8C7M3 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim9Q8C7M3 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim9Q8C7M3 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim9Q8C7M3 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trim9Q8C7M3 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim9Q8C7M3 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim9Q8C7M3 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.57■□□□□ 0.24
Trim9Q8C7M3 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trim9Q8C7M3 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim9Q8C7M3 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim9Q8C7M3 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.56■□□□□ 0.24
Trim9Q8C7M3 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim9Q8C7M3 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim9Q8C7M3 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim9Q8C7M3 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim9Q8C7M3 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim9Q8C7M3 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim9Q8C7M3 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim9Q8C7M3 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim9Q8C7M3 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim9Q8C7M3 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim9Q8C7M3 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim9Q8C7M3 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim9Q8C7M3 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim9Q8C7M3 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim9Q8C7M3 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim9Q8C7M3 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim9Q8C7M3 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim9Q8C7M3 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim9Q8C7M3 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.56■□□□□ 0.24
Trim9Q8C7M3 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Trim9Q8C7M3 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.56■□□□□ 0.24
Trim9Q8C7M3 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim9Q8C7M3 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim9Q8C7M3 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim9Q8C7M3 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
Trim9Q8C7M3 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Trim9Q8C7M3 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim9Q8C7M3 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim9Q8C7M3 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim9Q8C7M3 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim9Q8C7M3 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim9Q8C7M3 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim9Q8C7M3 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trim9Q8C7M3 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trim9Q8C7M3 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trim9Q8C7M3 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim9Q8C7M3 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim9Q8C7M3 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim9Q8C7M3 Gm12008-201ENSMUST00000117791 755 ntBASIC16.55■□□□□ 0.24
Trim9Q8C7M3 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim9Q8C7M3 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.55■□□□□ 0.24
Trim9Q8C7M3 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.55■□□□□ 0.24
Trim9Q8C7M3 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.55■□□□□ 0.24
Trim9Q8C7M3 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms