Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.09□□□□□ -0.15
Ppp1r3eQ8BRJ4 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ppp1r3eQ8BRJ4 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ppp1r3eQ8BRJ4 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Ppp1r3eQ8BRJ4 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.09□□□□□ -0.15
Ppp1r3eQ8BRJ4 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ppp1r3eQ8BRJ4 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ppp1r3eQ8BRJ4 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.09□□□□□ -0.15
Ppp1r3eQ8BRJ4 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.09□□□□□ -0.15
Ppp1r3eQ8BRJ4 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ppp1r3eQ8BRJ4 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Ppp1r3eQ8BRJ4 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Ppp1r3eQ8BRJ4 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Ppp1r3eQ8BRJ4 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ppp1r3eQ8BRJ4 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ppp1r3eQ8BRJ4 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.09□□□□□ -0.15
Ppp1r3eQ8BRJ4 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.09□□□□□ -0.15
Ppp1r3eQ8BRJ4 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ppp1r3eQ8BRJ4 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.09□□□□□ -0.15
Ppp1r3eQ8BRJ4 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ppp1r3eQ8BRJ4 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ppp1r3eQ8BRJ4 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ppp1r3eQ8BRJ4 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ppp1r3eQ8BRJ4 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ppp1r3eQ8BRJ4 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ppp1r3eQ8BRJ4 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ppp1r3eQ8BRJ4 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ppp1r3eQ8BRJ4 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ppp1r3eQ8BRJ4 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ppp1r3eQ8BRJ4 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Ppp1r3eQ8BRJ4 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ppp1r3eQ8BRJ4 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ppp1r3eQ8BRJ4 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ppp1r3eQ8BRJ4 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ppp1r3eQ8BRJ4 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ppp1r3eQ8BRJ4 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ppp1r3eQ8BRJ4 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ppp1r3eQ8BRJ4 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ppp1r3eQ8BRJ4 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ppp1r3eQ8BRJ4 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ppp1r3eQ8BRJ4 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ppp1r3eQ8BRJ4 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ppp1r3eQ8BRJ4 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ppp1r3eQ8BRJ4 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ppp1r3eQ8BRJ4 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ppp1r3eQ8BRJ4 Gm12497-201ENSMUST00000138778 237 ntBASIC14.08□□□□□ -0.16
Ppp1r3eQ8BRJ4 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.08□□□□□ -0.16
Ppp1r3eQ8BRJ4 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.08□□□□□ -0.16
Ppp1r3eQ8BRJ4 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ppp1r3eQ8BRJ4 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ppp1r3eQ8BRJ4 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ppp1r3eQ8BRJ4 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ppp1r3eQ8BRJ4 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ppp1r3eQ8BRJ4 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Ppp1r3eQ8BRJ4 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ppp1r3eQ8BRJ4 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ppp1r3eQ8BRJ4 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ppp1r3eQ8BRJ4 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ppp1r3eQ8BRJ4 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ppp1r3eQ8BRJ4 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ppp1r3eQ8BRJ4 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ppp1r3eQ8BRJ4 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ppp1r3eQ8BRJ4 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Ppp1r3eQ8BRJ4 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.07□□□□□ -0.16
Ppp1r3eQ8BRJ4 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ppp1r3eQ8BRJ4 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ppp1r3eQ8BRJ4 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.07□□□□□ -0.16
Ppp1r3eQ8BRJ4 Gm15165-201ENSMUST00000118140 502 ntBASIC14.07□□□□□ -0.16
Ppp1r3eQ8BRJ4 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ppp1r3eQ8BRJ4 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.07□□□□□ -0.16
Ppp1r3eQ8BRJ4 Gm7506-201ENSMUST00000207758 815 ntBASIC14.07□□□□□ -0.16
Ppp1r3eQ8BRJ4 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ppp1r3eQ8BRJ4 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ppp1r3eQ8BRJ4 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ppp1r3eQ8BRJ4 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ppp1r3eQ8BRJ4 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ppp1r3eQ8BRJ4 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ppp1r3eQ8BRJ4 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ppp1r3eQ8BRJ4 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ppp1r3eQ8BRJ4 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ppp1r3eQ8BRJ4 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ppp1r3eQ8BRJ4 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ppp1r3eQ8BRJ4 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ppp1r3eQ8BRJ4 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ppp1r3eQ8BRJ4 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ppp1r3eQ8BRJ4 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ppp1r3eQ8BRJ4 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ppp1r3eQ8BRJ4 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ppp1r3eQ8BRJ4 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ppp1r3eQ8BRJ4 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ppp1r3eQ8BRJ4 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ppp1r3eQ8BRJ4 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ppp1r3eQ8BRJ4 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ppp1r3eQ8BRJ4 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ppp1r3eQ8BRJ4 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ppp1r3eQ8BRJ4 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ppp1r3eQ8BRJ4 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ppp1r3eQ8BRJ4 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ppp1r3eQ8BRJ4 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ppp1r3eQ8BRJ4 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms