Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smco3Q8BQM7 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smco3Q8BQM7 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smco3Q8BQM7 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smco3Q8BQM7 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smco3Q8BQM7 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smco3Q8BQM7 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smco3Q8BQM7 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smco3Q8BQM7 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smco3Q8BQM7 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Smco3Q8BQM7 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smco3Q8BQM7 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smco3Q8BQM7 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Smco3Q8BQM7 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Smco3Q8BQM7 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC12.43□□□□□ -0.42
Smco3Q8BQM7 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC12.43□□□□□ -0.42
Smco3Q8BQM7 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smco3Q8BQM7 Gm44430-201ENSMUST00000203376 995 ntBASIC12.43□□□□□ -0.42
Smco3Q8BQM7 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Smco3Q8BQM7 Gm30025-201ENSMUST00000218555 728 ntBASIC12.43□□□□□ -0.42
Smco3Q8BQM7 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Smco3Q8BQM7 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smco3Q8BQM7 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Smco3Q8BQM7 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.43□□□□□ -0.42
Smco3Q8BQM7 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.43□□□□□ -0.42
Smco3Q8BQM7 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Smco3Q8BQM7 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.43□□□□□ -0.42
Smco3Q8BQM7 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Smco3Q8BQM7 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Smco3Q8BQM7 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Smco3Q8BQM7 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smco3Q8BQM7 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smco3Q8BQM7 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.42□□□□□ -0.42
Smco3Q8BQM7 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smco3Q8BQM7 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Smco3Q8BQM7 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Smco3Q8BQM7 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smco3Q8BQM7 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smco3Q8BQM7 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smco3Q8BQM7 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smco3Q8BQM7 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smco3Q8BQM7 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smco3Q8BQM7 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smco3Q8BQM7 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smco3Q8BQM7 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Smco3Q8BQM7 Gm12134-201ENSMUST00000122109 520 ntBASIC12.42□□□□□ -0.42
Smco3Q8BQM7 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Smco3Q8BQM7 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC12.42□□□□□ -0.42
Smco3Q8BQM7 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smco3Q8BQM7 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smco3Q8BQM7 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smco3Q8BQM7 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Smco3Q8BQM7 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Smco3Q8BQM7 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smco3Q8BQM7 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.42□□□□□ -0.42
Smco3Q8BQM7 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smco3Q8BQM7 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smco3Q8BQM7 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smco3Q8BQM7 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Smco3Q8BQM7 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Smco3Q8BQM7 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smco3Q8BQM7 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Smco3Q8BQM7 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smco3Q8BQM7 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smco3Q8BQM7 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smco3Q8BQM7 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smco3Q8BQM7 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smco3Q8BQM7 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Smco3Q8BQM7 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.41□□□□□ -0.42
Smco3Q8BQM7 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smco3Q8BQM7 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smco3Q8BQM7 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smco3Q8BQM7 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smco3Q8BQM7 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smco3Q8BQM7 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smco3Q8BQM7 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Smco3Q8BQM7 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smco3Q8BQM7 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Smco3Q8BQM7 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smco3Q8BQM7 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smco3Q8BQM7 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smco3Q8BQM7 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smco3Q8BQM7 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Smco3Q8BQM7 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Smco3Q8BQM7 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smco3Q8BQM7 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.41□□□□□ -0.42
Smco3Q8BQM7 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Smco3Q8BQM7 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smco3Q8BQM7 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.41□□□□□ -0.42
Smco3Q8BQM7 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC12.41□□□□□ -0.42
Smco3Q8BQM7 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smco3Q8BQM7 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smco3Q8BQM7 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smco3Q8BQM7 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smco3Q8BQM7 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smco3Q8BQM7 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smco3Q8BQM7 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smco3Q8BQM7 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Smco3Q8BQM7 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smco3Q8BQM7 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms