Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nop53Q8BK35 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.13■□□□□ 0.17
Nop53Q8BK35 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Nop53Q8BK35 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Nop53Q8BK35 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.13■□□□□ 0.17
Nop53Q8BK35 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nop53Q8BK35 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nop53Q8BK35 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nop53Q8BK35 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nop53Q8BK35 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.13■□□□□ 0.17
Nop53Q8BK35 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nop53Q8BK35 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Nop53Q8BK35 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nop53Q8BK35 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nop53Q8BK35 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nop53Q8BK35 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nop53Q8BK35 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nop53Q8BK35 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Nop53Q8BK35 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nop53Q8BK35 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nop53Q8BK35 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nop53Q8BK35 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nop53Q8BK35 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.12■□□□□ 0.17
Nop53Q8BK35 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nop53Q8BK35 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Nop53Q8BK35 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nop53Q8BK35 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.12■□□□□ 0.17
Nop53Q8BK35 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nop53Q8BK35 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.12■□□□□ 0.17
Nop53Q8BK35 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.12■□□□□ 0.17
Nop53Q8BK35 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Nop53Q8BK35 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.12■□□□□ 0.17
Nop53Q8BK35 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.12■□□□□ 0.17
Nop53Q8BK35 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.12■□□□□ 0.17
Nop53Q8BK35 Mzt1-203ENSMUST00000227948 952 ntBASIC16.12■□□□□ 0.17
Nop53Q8BK35 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nop53Q8BK35 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nop53Q8BK35 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nop53Q8BK35 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nop53Q8BK35 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Nop53Q8BK35 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nop53Q8BK35 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nop53Q8BK35 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nop53Q8BK35 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nop53Q8BK35 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Nop53Q8BK35 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nop53Q8BK35 Efs-202ENSMUST00000227037 2540 ntBASIC16.11■□□□□ 0.17
Nop53Q8BK35 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC16.11■□□□□ 0.17
Nop53Q8BK35 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nop53Q8BK35 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Nop53Q8BK35 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC16.11■□□□□ 0.17
Nop53Q8BK35 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Nop53Q8BK35 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Nop53Q8BK35 Mir8098-201ENSMUST00000184011 137 ntBASIC16.11■□□□□ 0.17
Nop53Q8BK35 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.11■□□□□ 0.17
Nop53Q8BK35 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nop53Q8BK35 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nop53Q8BK35 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nop53Q8BK35 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.11■□□□□ 0.17
Nop53Q8BK35 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nop53Q8BK35 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nop53Q8BK35 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nop53Q8BK35 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nop53Q8BK35 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nop53Q8BK35 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.11■□□□□ 0.17
Nop53Q8BK35 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Nop53Q8BK35 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nop53Q8BK35 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Nop53Q8BK35 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nop53Q8BK35 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nop53Q8BK35 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nop53Q8BK35 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nop53Q8BK35 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.1■□□□□ 0.17
Nop53Q8BK35 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Nop53Q8BK35 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nop53Q8BK35 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Nop53Q8BK35 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nop53Q8BK35 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nop53Q8BK35 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nop53Q8BK35 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nop53Q8BK35 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Nop53Q8BK35 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nop53Q8BK35 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.1■□□□□ 0.17
Nop53Q8BK35 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nop53Q8BK35 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.1■□□□□ 0.17
Nop53Q8BK35 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.1■□□□□ 0.17
Nop53Q8BK35 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Nop53Q8BK35 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nop53Q8BK35 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nop53Q8BK35 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nop53Q8BK35 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nop53Q8BK35 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Nop53Q8BK35 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nop53Q8BK35 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nop53Q8BK35 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nop53Q8BK35 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Nop53Q8BK35 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nop53Q8BK35 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Nop53Q8BK35 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nop53Q8BK35 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms