Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Depdc1bQ8BH88 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC16.38■□□□□ 0.21
Depdc1bQ8BH88 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Depdc1bQ8BH88 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Depdc1bQ8BH88 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Depdc1bQ8BH88 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Depdc1bQ8BH88 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Depdc1bQ8BH88 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Depdc1bQ8BH88 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Depdc1bQ8BH88 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC16.38■□□□□ 0.21
Depdc1bQ8BH88 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.38■□□□□ 0.21
Depdc1bQ8BH88 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Depdc1bQ8BH88 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Depdc1bQ8BH88 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Depdc1bQ8BH88 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Depdc1bQ8BH88 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Depdc1bQ8BH88 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Depdc1bQ8BH88 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Depdc1bQ8BH88 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Depdc1bQ8BH88 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Depdc1bQ8BH88 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Depdc1bQ8BH88 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.37■□□□□ 0.21
Depdc1bQ8BH88 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.37■□□□□ 0.21
Depdc1bQ8BH88 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.37■□□□□ 0.21
Depdc1bQ8BH88 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.37■□□□□ 0.21
Depdc1bQ8BH88 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Depdc1bQ8BH88 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Depdc1bQ8BH88 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.37■□□□□ 0.21
Depdc1bQ8BH88 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Depdc1bQ8BH88 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Depdc1bQ8BH88 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Depdc1bQ8BH88 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Depdc1bQ8BH88 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Depdc1bQ8BH88 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Depdc1bQ8BH88 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Depdc1bQ8BH88 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Depdc1bQ8BH88 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Depdc1bQ8BH88 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Depdc1bQ8BH88 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Depdc1bQ8BH88 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Depdc1bQ8BH88 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Depdc1bQ8BH88 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Depdc1bQ8BH88 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Depdc1bQ8BH88 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Depdc1bQ8BH88 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Depdc1bQ8BH88 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Depdc1bQ8BH88 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Depdc1bQ8BH88 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Depdc1bQ8BH88 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Depdc1bQ8BH88 Gm8318-201ENSMUST00000182954 872 ntBASIC16.36■□□□□ 0.21
Depdc1bQ8BH88 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Depdc1bQ8BH88 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.36■□□□□ 0.21
Depdc1bQ8BH88 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Depdc1bQ8BH88 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Depdc1bQ8BH88 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC16.36■□□□□ 0.21
Depdc1bQ8BH88 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Depdc1bQ8BH88 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Depdc1bQ8BH88 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Depdc1bQ8BH88 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
Depdc1bQ8BH88 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Depdc1bQ8BH88 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Depdc1bQ8BH88 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Depdc1bQ8BH88 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.36■□□□□ 0.21
Depdc1bQ8BH88 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Depdc1bQ8BH88 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Depdc1bQ8BH88 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Depdc1bQ8BH88 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.35■□□□□ 0.21
Depdc1bQ8BH88 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Depdc1bQ8BH88 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Depdc1bQ8BH88 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.35■□□□□ 0.21
Depdc1bQ8BH88 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Depdc1bQ8BH88 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.35■□□□□ 0.21
Depdc1bQ8BH88 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Depdc1bQ8BH88 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Depdc1bQ8BH88 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Depdc1bQ8BH88 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Depdc1bQ8BH88 Gm9727-201ENSMUST00000161387 555 ntBASIC16.35■□□□□ 0.21
Depdc1bQ8BH88 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Depdc1bQ8BH88 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.35■□□□□ 0.21
Depdc1bQ8BH88 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Depdc1bQ8BH88 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Depdc1bQ8BH88 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Depdc1bQ8BH88 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.35■□□□□ 0.21
Depdc1bQ8BH88 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Depdc1bQ8BH88 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Depdc1bQ8BH88 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Depdc1bQ8BH88 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Depdc1bQ8BH88 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Depdc1bQ8BH88 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.35■□□□□ 0.21
Depdc1bQ8BH88 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.35■□□□□ 0.21
Depdc1bQ8BH88 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Depdc1bQ8BH88 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Depdc1bQ8BH88 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.34■□□□□ 0.21
Depdc1bQ8BH88 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Depdc1bQ8BH88 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Depdc1bQ8BH88 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Depdc1bQ8BH88 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Depdc1bQ8BH88 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Depdc1bQ8BH88 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Depdc1bQ8BH88 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms