Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Gm30025-201ENSMUST00000218555 728 ntBASIC13.19□□□□□ -0.3
Slc5a7Q8BGY9 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc5a7Q8BGY9 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc5a7Q8BGY9 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC13.19□□□□□ -0.3
Slc5a7Q8BGY9 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc5a7Q8BGY9 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc5a7Q8BGY9 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc5a7Q8BGY9 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc5a7Q8BGY9 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc5a7Q8BGY9 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc5a7Q8BGY9 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Slc5a7Q8BGY9 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc5a7Q8BGY9 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Slc5a7Q8BGY9 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Slc5a7Q8BGY9 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Slc5a7Q8BGY9 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc5a7Q8BGY9 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc5a7Q8BGY9 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc5a7Q8BGY9 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Slc5a7Q8BGY9 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc5a7Q8BGY9 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc5a7Q8BGY9 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Slc5a7Q8BGY9 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Slc5a7Q8BGY9 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc5a7Q8BGY9 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc5a7Q8BGY9 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Slc5a7Q8BGY9 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Slc5a7Q8BGY9 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Slc5a7Q8BGY9 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Slc5a7Q8BGY9 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC13.18□□□□□ -0.3
Slc5a7Q8BGY9 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc5a7Q8BGY9 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Slc5a7Q8BGY9 Gm5417-201ENSMUST00000079706 384 ntBASIC13.18□□□□□ -0.3
Slc5a7Q8BGY9 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc5a7Q8BGY9 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc5a7Q8BGY9 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Slc5a7Q8BGY9 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc5a7Q8BGY9 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Slc5a7Q8BGY9 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc5a7Q8BGY9 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc5a7Q8BGY9 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc5a7Q8BGY9 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc5a7Q8BGY9 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc5a7Q8BGY9 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc5a7Q8BGY9 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc5a7Q8BGY9 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc5a7Q8BGY9 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc5a7Q8BGY9 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc5a7Q8BGY9 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc5a7Q8BGY9 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Slc5a7Q8BGY9 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc5a7Q8BGY9 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Slc5a7Q8BGY9 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Slc5a7Q8BGY9 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc5a7Q8BGY9 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc5a7Q8BGY9 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc5a7Q8BGY9 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc5a7Q8BGY9 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc5a7Q8BGY9 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc5a7Q8BGY9 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc5a7Q8BGY9 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.17□□□□□ -0.3
Slc5a7Q8BGY9 Celf4-206ENSMUST00000224553 1729 ntBASIC13.17□□□□□ -0.3
Slc5a7Q8BGY9 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc5a7Q8BGY9 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc5a7Q8BGY9 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc5a7Q8BGY9 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Slc5a7Q8BGY9 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC13.17□□□□□ -0.3
Slc5a7Q8BGY9 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Slc5a7Q8BGY9 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Slc5a7Q8BGY9 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc5a7Q8BGY9 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Slc5a7Q8BGY9 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc5a7Q8BGY9 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Slc5a7Q8BGY9 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.17□□□□□ -0.3
Slc5a7Q8BGY9 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Slc5a7Q8BGY9 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc5a7Q8BGY9 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Slc5a7Q8BGY9 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Slc5a7Q8BGY9 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Slc5a7Q8BGY9 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Slc5a7Q8BGY9 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Slc5a7Q8BGY9 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
Slc5a7Q8BGY9 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Slc5a7Q8BGY9 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Slc5a7Q8BGY9 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Slc5a7Q8BGY9 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Slc5a7Q8BGY9 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Slc5a7Q8BGY9 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Slc5a7Q8BGY9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.16□□□□□ -0.3
Slc5a7Q8BGY9 Gm13436-201ENSMUST00000120418 567 ntBASIC13.16□□□□□ -0.3
Slc5a7Q8BGY9 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.16□□□□□ -0.3
Slc5a7Q8BGY9 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Slc5a7Q8BGY9 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.16□□□□□ -0.3
Slc5a7Q8BGY9 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC13.16□□□□□ -0.3
Slc5a7Q8BGY9 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC13.16□□□□□ -0.3
Slc5a7Q8BGY9 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Slc5a7Q8BGY9 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC13.16□□□□□ -0.3
Slc5a7Q8BGY9 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Slc5a7Q8BGY9 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Slc5a7Q8BGY9 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms