Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim50Q810I2 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim50Q810I2 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim50Q810I2 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim50Q810I2 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Trim50Q810I2 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim50Q810I2 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trim50Q810I2 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim50Q810I2 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim50Q810I2 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim50Q810I2 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim50Q810I2 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim50Q810I2 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim50Q810I2 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim50Q810I2 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim50Q810I2 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.66□□□□□ -0.06
Trim50Q810I2 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim50Q810I2 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.66□□□□□ -0.06
Trim50Q810I2 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.66□□□□□ -0.06
Trim50Q810I2 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim50Q810I2 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.66□□□□□ -0.06
Trim50Q810I2 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim50Q810I2 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim50Q810I2 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim50Q810I2 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim50Q810I2 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim50Q810I2 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim50Q810I2 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Trim50Q810I2 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim50Q810I2 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim50Q810I2 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim50Q810I2 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim50Q810I2 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim50Q810I2 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.65□□□□□ -0.06
Trim50Q810I2 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim50Q810I2 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim50Q810I2 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trim50Q810I2 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim50Q810I2 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim50Q810I2 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim50Q810I2 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim50Q810I2 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim50Q810I2 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trim50Q810I2 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim50Q810I2 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim50Q810I2 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim50Q810I2 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim50Q810I2 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim50Q810I2 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim50Q810I2 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.65□□□□□ -0.06
Trim50Q810I2 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim50Q810I2 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim50Q810I2 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim50Q810I2 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.65□□□□□ -0.06
Trim50Q810I2 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim50Q810I2 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim50Q810I2 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim50Q810I2 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim50Q810I2 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim50Q810I2 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim50Q810I2 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim50Q810I2 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.65□□□□□ -0.06
Trim50Q810I2 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim50Q810I2 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim50Q810I2 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim50Q810I2 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Trim50Q810I2 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim50Q810I2 Celf4-206ENSMUST00000224553 1729 ntBASIC14.64□□□□□ -0.07
Trim50Q810I2 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim50Q810I2 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim50Q810I2 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim50Q810I2 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.64□□□□□ -0.07
Trim50Q810I2 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
Trim50Q810I2 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim50Q810I2 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim50Q810I2 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim50Q810I2 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.64□□□□□ -0.07
Trim50Q810I2 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.64□□□□□ -0.07
Trim50Q810I2 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.64□□□□□ -0.07
Trim50Q810I2 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim50Q810I2 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim50Q810I2 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim50Q810I2 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim50Q810I2 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.64□□□□□ -0.07
Trim50Q810I2 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim50Q810I2 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim50Q810I2 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim50Q810I2 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim50Q810I2 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim50Q810I2 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim50Q810I2 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim50Q810I2 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim50Q810I2 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.64□□□□□ -0.07
Trim50Q810I2 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.64□□□□□ -0.07
Trim50Q810I2 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim50Q810I2 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim50Q810I2 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim50Q810I2 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim50Q810I2 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim50Q810I2 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms