Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Prpf40bQ80W14 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf40bQ80W14 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf40bQ80W14 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf40bQ80W14 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf40bQ80W14 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf40bQ80W14 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf40bQ80W14 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Prpf40bQ80W14 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf40bQ80W14 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf40bQ80W14 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf40bQ80W14 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Prpf40bQ80W14 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.36■□□□□ 0.37
Prpf40bQ80W14 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.35■□□□□ 0.37
Prpf40bQ80W14 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Gm22065-201ENSMUST00000103753 110 ntBASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Gm22066-201ENSMUST00000103761 110 ntBASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Gm24932-201ENSMUST00000103763 110 ntBASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Gm24115-201ENSMUST00000103799 110 ntBASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Gm22190-201ENSMUST00000103827 110 ntBASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Gm22191-201ENSMUST00000103831 110 ntBASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Gm24721-201ENSMUST00000103849 110 ntBASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Gm28018-201ENSMUST00000103869 110 ntBASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Gm26399-201ENSMUST00000103937 110 ntBASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Gm24158-201ENSMUST00000175263 71 ntBASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Gm25349-201ENSMUST00000177728 110 ntBASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Gm23616-201ENSMUST00000177797 110 ntBASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Gm25871-201ENSMUST00000177816 110 ntBASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Gm24752-201ENSMUST00000178240 110 ntBASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Gm24496-201ENSMUST00000178287 110 ntBASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Gm25649-201ENSMUST00000178476 110 ntBASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Gm25548-201ENSMUST00000178681 110 ntBASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Gm23147-201ENSMUST00000178841 110 ntBASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Gm26095-201ENSMUST00000179270 110 ntBASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Gm22171-201ENSMUST00000179283 110 ntBASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Gm23936-201ENSMUST00000179354 110 ntBASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Gm22619-201ENSMUST00000179516 110 ntBASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Gm25255-201ENSMUST00000179579 110 ntBASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Gm24755-201ENSMUST00000179691 110 ntBASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Gm26506-201ENSMUST00000179692 110 ntBASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Gm25086-201ENSMUST00000179931 110 ntBASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Gm23243-201ENSMUST00000180047 110 ntBASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Gm24659-201ENSMUST00000180212 110 ntBASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Gm24169-201ENSMUST00000180244 110 ntBASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Gm23689-201ENSMUST00000180354 110 ntBASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Gm27359-201ENSMUST00000184153 110 ntBASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Gm27785-201ENSMUST00000184268 110 ntBASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Gm27466-201ENSMUST00000184396 110 ntBASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Gm27703-201ENSMUST00000184836 110 ntBASIC17.35■□□□□ 0.37
Prpf40bQ80W14 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf40bQ80W14 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf40bQ80W14 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf40bQ80W14 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf40bQ80W14 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf40bQ80W14 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf40bQ80W14 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf40bQ80W14 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf40bQ80W14 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf40bQ80W14 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf40bQ80W14 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Prpf40bQ80W14 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf40bQ80W14 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.34■□□□□ 0.37
Prpf40bQ80W14 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf40bQ80W14 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC17.34■□□□□ 0.37
Prpf40bQ80W14 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.34■□□□□ 0.37
Prpf40bQ80W14 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Prpf40bQ80W14 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf40bQ80W14 Rpph1-201ENSMUST00000175096 319 ntBASIC17.34■□□□□ 0.37
Prpf40bQ80W14 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf40bQ80W14 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf40bQ80W14 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf40bQ80W14 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf40bQ80W14 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf40bQ80W14 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf40bQ80W14 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Prpf40bQ80W14 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf40bQ80W14 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf40bQ80W14 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf40bQ80W14 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf40bQ80W14 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Prpf40bQ80W14 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Prpf40bQ80W14 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
Prpf40bQ80W14 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf40bQ80W14 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf40bQ80W14 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf40bQ80W14 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms