Protein–RNA interactions for Protein: Q80UJ7

Rab3gap1, Rab3 GTPase-activating protein catalytic subunit, mousemouse

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab3gap1Q80UJ7 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rab3gap1Q80UJ7 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Rab3gap1Q80UJ7 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rab3gap1Q80UJ7 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rab3gap1Q80UJ7 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rab3gap1Q80UJ7 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab3gap1Q80UJ7 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab3gap1Q80UJ7 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab3gap1Q80UJ7 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC18.26■□□□□ 0.51
Rab3gap1Q80UJ7 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab3gap1Q80UJ7 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab3gap1Q80UJ7 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab3gap1Q80UJ7 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab3gap1Q80UJ7 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Rab3gap1Q80UJ7 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab3gap1Q80UJ7 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Rab3gap1Q80UJ7 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab3gap1Q80UJ7 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab3gap1Q80UJ7 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rab3gap1Q80UJ7 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rab3gap1Q80UJ7 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC18.26■□□□□ 0.51
Rab3gap1Q80UJ7 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rab3gap1Q80UJ7 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC18.26■□□□□ 0.51
Rab3gap1Q80UJ7 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC18.26■□□□□ 0.51
Rab3gap1Q80UJ7 Gm15483-201ENSMUST00000120338 456 ntBASIC18.26■□□□□ 0.51
Rab3gap1Q80UJ7 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rab3gap1Q80UJ7 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rab3gap1Q80UJ7 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC18.26■□□□□ 0.51
Rab3gap1Q80UJ7 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC18.26■□□□□ 0.51
Rab3gap1Q80UJ7 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab3gap1Q80UJ7 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab3gap1Q80UJ7 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab3gap1Q80UJ7 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Rab3gap1Q80UJ7 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab3gap1Q80UJ7 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab3gap1Q80UJ7 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Rab3gap1Q80UJ7 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rab3gap1Q80UJ7 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rab3gap1Q80UJ7 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab3gap1Q80UJ7 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab3gap1Q80UJ7 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rab3gap1Q80UJ7 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rab3gap1Q80UJ7 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rab3gap1Q80UJ7 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rab3gap1Q80UJ7 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rab3gap1Q80UJ7 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rab3gap1Q80UJ7 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rab3gap1Q80UJ7 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Rab3gap1Q80UJ7 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rab3gap1Q80UJ7 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rab3gap1Q80UJ7 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rab3gap1Q80UJ7 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rab3gap1Q80UJ7 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rab3gap1Q80UJ7 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rab3gap1Q80UJ7 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rab3gap1Q80UJ7 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rab3gap1Q80UJ7 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC18.25■□□□□ 0.51
Rab3gap1Q80UJ7 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Rab3gap1Q80UJ7 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rab3gap1Q80UJ7 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC18.25■□□□□ 0.51
Rab3gap1Q80UJ7 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rab3gap1Q80UJ7 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rab3gap1Q80UJ7 AC140397.2-201ENSMUST00000224213 834 ntBASIC18.25■□□□□ 0.51
Rab3gap1Q80UJ7 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Rab3gap1Q80UJ7 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Rab3gap1Q80UJ7 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rab3gap1Q80UJ7 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
Rab3gap1Q80UJ7 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rab3gap1Q80UJ7 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rab3gap1Q80UJ7 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rab3gap1Q80UJ7 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rab3gap1Q80UJ7 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rab3gap1Q80UJ7 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rab3gap1Q80UJ7 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.24■□□□□ 0.51
Rab3gap1Q80UJ7 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Rab3gap1Q80UJ7 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC18.24■□□□□ 0.51
Rab3gap1Q80UJ7 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC18.24■□□□□ 0.51
Rab3gap1Q80UJ7 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rab3gap1Q80UJ7 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
Rab3gap1Q80UJ7 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.24■□□□□ 0.51
Rab3gap1Q80UJ7 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rab3gap1Q80UJ7 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rab3gap1Q80UJ7 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
Rab3gap1Q80UJ7 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab3gap1Q80UJ7 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Rab3gap1Q80UJ7 Celf4-206ENSMUST00000224553 1729 ntBASIC18.23■□□□□ 0.51
Rab3gap1Q80UJ7 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Rab3gap1Q80UJ7 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab3gap1Q80UJ7 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab3gap1Q80UJ7 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab3gap1Q80UJ7 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Rab3gap1Q80UJ7 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab3gap1Q80UJ7 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab3gap1Q80UJ7 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rab3gap1Q80UJ7 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab3gap1Q80UJ7 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Rab3gap1Q80UJ7 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC18.23■□□□□ 0.51
Rab3gap1Q80UJ7 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab3gap1Q80UJ7 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rab3gap1Q80UJ7 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms