Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh8Q7TSK3 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh8Q7TSK3 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Pcdh8Q7TSK3 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Pcdh8Q7TSK3 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh8Q7TSK3 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Pcdh8Q7TSK3 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh8Q7TSK3 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh8Q7TSK3 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh8Q7TSK3 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh8Q7TSK3 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh8Q7TSK3 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh8Q7TSK3 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh8Q7TSK3 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh8Q7TSK3 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh8Q7TSK3 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh8Q7TSK3 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh8Q7TSK3 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh8Q7TSK3 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh8Q7TSK3 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh8Q7TSK3 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh8Q7TSK3 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Pcdh8Q7TSK3 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Pcdh8Q7TSK3 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.84□□□□□ -0.03
Pcdh8Q7TSK3 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Pcdh8Q7TSK3 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Pcdh8Q7TSK3 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh8Q7TSK3 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh8Q7TSK3 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.83□□□□□ -0.03
Pcdh8Q7TSK3 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdh8Q7TSK3 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.83□□□□□ -0.03
Pcdh8Q7TSK3 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdh8Q7TSK3 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdh8Q7TSK3 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh8Q7TSK3 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh8Q7TSK3 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.83□□□□□ -0.04
Pcdh8Q7TSK3 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh8Q7TSK3 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh8Q7TSK3 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh8Q7TSK3 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.83□□□□□ -0.04
Pcdh8Q7TSK3 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.83□□□□□ -0.04
Pcdh8Q7TSK3 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh8Q7TSK3 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.83□□□□□ -0.04
Pcdh8Q7TSK3 Gm10576-201ENSMUST00000191927 825 ntBASIC14.83□□□□□ -0.04
Pcdh8Q7TSK3 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh8Q7TSK3 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh8Q7TSK3 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh8Q7TSK3 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh8Q7TSK3 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh8Q7TSK3 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.83□□□□□ -0.04
Pcdh8Q7TSK3 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.83□□□□□ -0.04
Pcdh8Q7TSK3 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh8Q7TSK3 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh8Q7TSK3 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Pcdh8Q7TSK3 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.83□□□□□ -0.04
Pcdh8Q7TSK3 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
Pcdh8Q7TSK3 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh8Q7TSK3 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Pcdh8Q7TSK3 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Pcdh8Q7TSK3 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Pcdh8Q7TSK3 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Pcdh8Q7TSK3 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh8Q7TSK3 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh8Q7TSK3 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh8Q7TSK3 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh8Q7TSK3 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh8Q7TSK3 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh8Q7TSK3 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh8Q7TSK3 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh8Q7TSK3 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh8Q7TSK3 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.82□□□□□ -0.04
Pcdh8Q7TSK3 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh8Q7TSK3 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh8Q7TSK3 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.82□□□□□ -0.04
Pcdh8Q7TSK3 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh8Q7TSK3 Gm8396-201ENSMUST00000057361 823 ntBASIC14.82□□□□□ -0.04
Pcdh8Q7TSK3 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh8Q7TSK3 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh8Q7TSK3 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Pcdh8Q7TSK3 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh8Q7TSK3 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh8Q7TSK3 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Pcdh8Q7TSK3 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh8Q7TSK3 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh8Q7TSK3 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh8Q7TSK3 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh8Q7TSK3 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh8Q7TSK3 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh8Q7TSK3 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh8Q7TSK3 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Pcdh8Q7TSK3 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh8Q7TSK3 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Pcdh8Q7TSK3 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh8Q7TSK3 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh8Q7TSK3 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.81□□□□□ -0.04
Pcdh8Q7TSK3 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh8Q7TSK3 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.81□□□□□ -0.04
Pcdh8Q7TSK3 Gm45612-201ENSMUST00000211320 160 ntBASIC14.81□□□□□ -0.04
Pcdh8Q7TSK3 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh8Q7TSK3 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms