Protein–RNA interactions for Protein: Q78RX3

Smim12, Small integral membrane protein 12, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim12Q78RX3 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smim12Q78RX3 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.66□□□□□ -0.38
Smim12Q78RX3 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smim12Q78RX3 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smim12Q78RX3 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smim12Q78RX3 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smim12Q78RX3 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Smim12Q78RX3 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.66□□□□□ -0.38
Smim12Q78RX3 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smim12Q78RX3 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.65□□□□□ -0.38
Smim12Q78RX3 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.65□□□□□ -0.38
Smim12Q78RX3 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smim12Q78RX3 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Smim12Q78RX3 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smim12Q78RX3 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Smim12Q78RX3 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smim12Q78RX3 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smim12Q78RX3 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smim12Q78RX3 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smim12Q78RX3 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smim12Q78RX3 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.65□□□□□ -0.38
Smim12Q78RX3 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.65□□□□□ -0.38
Smim12Q78RX3 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smim12Q78RX3 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smim12Q78RX3 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smim12Q78RX3 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Smim12Q78RX3 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Smim12Q78RX3 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smim12Q78RX3 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smim12Q78RX3 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Smim12Q78RX3 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smim12Q78RX3 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smim12Q78RX3 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smim12Q78RX3 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smim12Q78RX3 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smim12Q78RX3 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smim12Q78RX3 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smim12Q78RX3 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Smim12Q78RX3 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim12Q78RX3 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim12Q78RX3 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim12Q78RX3 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim12Q78RX3 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Smim12Q78RX3 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim12Q78RX3 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim12Q78RX3 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smim12Q78RX3 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim12Q78RX3 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.64□□□□□ -0.39
Smim12Q78RX3 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.64□□□□□ -0.39
Smim12Q78RX3 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Smim12Q78RX3 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim12Q78RX3 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim12Q78RX3 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim12Q78RX3 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim12Q78RX3 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim12Q78RX3 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim12Q78RX3 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.64□□□□□ -0.39
Smim12Q78RX3 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim12Q78RX3 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim12Q78RX3 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Smim12Q78RX3 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim12Q78RX3 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.64□□□□□ -0.39
Smim12Q78RX3 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.64□□□□□ -0.39
Smim12Q78RX3 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.64□□□□□ -0.39
Smim12Q78RX3 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Smim12Q78RX3 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Smim12Q78RX3 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smim12Q78RX3 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smim12Q78RX3 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smim12Q78RX3 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim12Q78RX3 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smim12Q78RX3 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim12Q78RX3 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Smim12Q78RX3 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim12Q78RX3 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim12Q78RX3 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim12Q78RX3 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.64□□□□□ -0.39
Smim12Q78RX3 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Smim12Q78RX3 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Smim12Q78RX3 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smim12Q78RX3 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim12Q78RX3 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim12Q78RX3 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim12Q78RX3 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.64□□□□□ -0.39
Smim12Q78RX3 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim12Q78RX3 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.64□□□□□ -0.39
Smim12Q78RX3 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Smim12Q78RX3 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.63□□□□□ -0.39
Smim12Q78RX3 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smim12Q78RX3 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smim12Q78RX3 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smim12Q78RX3 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smim12Q78RX3 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smim12Q78RX3 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smim12Q78RX3 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smim12Q78RX3 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Smim12Q78RX3 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smim12Q78RX3 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.63□□□□□ -0.39
Smim12Q78RX3 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smim12Q78RX3 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms