Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx58Q6Q899 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx58Q6Q899 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx58Q6Q899 Gm42901-201ENSMUST00000197735 3171 ntBASIC18.57■□□□□ 0.56
Ddx58Q6Q899 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx58Q6Q899 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx58Q6Q899 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx58Q6Q899 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx58Q6Q899 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Ddx58Q6Q899 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx58Q6Q899 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Ddx58Q6Q899 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Ddx58Q6Q899 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx58Q6Q899 AC133083.1-201ENSMUST00000221736 2209 ntBASIC18.57■□□□□ 0.56
Ddx58Q6Q899 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC18.57■□□□□ 0.56
Ddx58Q6Q899 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Ddx58Q6Q899 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx58Q6Q899 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx58Q6Q899 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx58Q6Q899 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx58Q6Q899 Gm7336-201ENSMUST00000107041 1232 ntBASIC18.56■□□□□ 0.56
Ddx58Q6Q899 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx58Q6Q899 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx58Q6Q899 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC18.56■□□□□ 0.56
Ddx58Q6Q899 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC18.56■□□□□ 0.56
Ddx58Q6Q899 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx58Q6Q899 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx58Q6Q899 Gm10313-201ENSMUST00000095320 1002 ntBASIC18.56■□□□□ 0.56
Ddx58Q6Q899 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx58Q6Q899 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx58Q6Q899 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Ddx58Q6Q899 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx58Q6Q899 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx58Q6Q899 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx58Q6Q899 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
Ddx58Q6Q899 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Ddx58Q6Q899 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx58Q6Q899 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx58Q6Q899 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Ddx58Q6Q899 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Ddx58Q6Q899 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx58Q6Q899 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx58Q6Q899 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx58Q6Q899 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC18.55■□□□□ 0.56
Ddx58Q6Q899 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx58Q6Q899 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC18.55■□□□□ 0.56
Ddx58Q6Q899 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx58Q6Q899 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx58Q6Q899 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx58Q6Q899 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx58Q6Q899 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx58Q6Q899 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC18.55■□□□□ 0.56
Ddx58Q6Q899 Gm27430-201ENSMUST00000184585 107 ntBASIC18.55■□□□□ 0.56
Ddx58Q6Q899 Gm44333-201ENSMUST00000197168 107 ntBASIC18.55■□□□□ 0.56
Ddx58Q6Q899 Klk2-ps-201ENSMUST00000205342 571 ntBASIC18.55■□□□□ 0.56
Ddx58Q6Q899 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC18.55■□□□□ 0.56
Ddx58Q6Q899 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx58Q6Q899 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx58Q6Q899 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx58Q6Q899 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx58Q6Q899 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx58Q6Q899 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx58Q6Q899 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC18.55■□□□□ 0.56
Ddx58Q6Q899 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx58Q6Q899 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx58Q6Q899 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx58Q6Q899 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx58Q6Q899 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx58Q6Q899 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC18.55■□□□□ 0.56
Ddx58Q6Q899 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx58Q6Q899 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx58Q6Q899 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx58Q6Q899 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx58Q6Q899 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx58Q6Q899 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx58Q6Q899 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx58Q6Q899 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx58Q6Q899 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Ddx58Q6Q899 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx58Q6Q899 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx58Q6Q899 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.54■□□□□ 0.56
Ddx58Q6Q899 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx58Q6Q899 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx58Q6Q899 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx58Q6Q899 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx58Q6Q899 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC18.54■□□□□ 0.56
Ddx58Q6Q899 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC18.54■□□□□ 0.56
Ddx58Q6Q899 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx58Q6Q899 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Ddx58Q6Q899 Gm9824-201ENSMUST00000178707 561 ntBASIC18.54■□□□□ 0.56
Ddx58Q6Q899 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx58Q6Q899 Gm5779-201ENSMUST00000218467 910 ntBASIC18.54■□□□□ 0.56
Ddx58Q6Q899 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx58Q6Q899 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.54■□□□□ 0.56
Ddx58Q6Q899 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx58Q6Q899 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx58Q6Q899 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
Ddx58Q6Q899 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Ddx58Q6Q899 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx58Q6Q899 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms