Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sp140Q6NSQ5 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.27■□□□□ 0.04
Sp140Q6NSQ5 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.27■□□□□ 0.04
Sp140Q6NSQ5 Mir8098-201ENSMUST00000184011 137 ntBASIC15.27■□□□□ 0.04
Sp140Q6NSQ5 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.27■□□□□ 0.04
Sp140Q6NSQ5 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sp140Q6NSQ5 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Sp140Q6NSQ5 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sp140Q6NSQ5 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.27■□□□□ 0.03
Sp140Q6NSQ5 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sp140Q6NSQ5 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sp140Q6NSQ5 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sp140Q6NSQ5 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sp140Q6NSQ5 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sp140Q6NSQ5 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sp140Q6NSQ5 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sp140Q6NSQ5 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sp140Q6NSQ5 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sp140Q6NSQ5 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sp140Q6NSQ5 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sp140Q6NSQ5 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sp140Q6NSQ5 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sp140Q6NSQ5 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sp140Q6NSQ5 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sp140Q6NSQ5 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sp140Q6NSQ5 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sp140Q6NSQ5 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Sp140Q6NSQ5 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sp140Q6NSQ5 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sp140Q6NSQ5 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sp140Q6NSQ5 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sp140Q6NSQ5 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sp140Q6NSQ5 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sp140Q6NSQ5 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sp140Q6NSQ5 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sp140Q6NSQ5 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sp140Q6NSQ5 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sp140Q6NSQ5 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sp140Q6NSQ5 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sp140Q6NSQ5 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Sp140Q6NSQ5 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sp140Q6NSQ5 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sp140Q6NSQ5 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.26■□□□□ 0.03
Sp140Q6NSQ5 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Sp140Q6NSQ5 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.26■□□□□ 0.03
Sp140Q6NSQ5 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sp140Q6NSQ5 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sp140Q6NSQ5 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sp140Q6NSQ5 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sp140Q6NSQ5 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Sp140Q6NSQ5 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sp140Q6NSQ5 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sp140Q6NSQ5 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sp140Q6NSQ5 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sp140Q6NSQ5 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sp140Q6NSQ5 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Sp140Q6NSQ5 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sp140Q6NSQ5 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sp140Q6NSQ5 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sp140Q6NSQ5 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sp140Q6NSQ5 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sp140Q6NSQ5 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Sp140Q6NSQ5 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.25■□□□□ 0.03
Sp140Q6NSQ5 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sp140Q6NSQ5 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sp140Q6NSQ5 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sp140Q6NSQ5 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sp140Q6NSQ5 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Sp140Q6NSQ5 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Sp140Q6NSQ5 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Sp140Q6NSQ5 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Sp140Q6NSQ5 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sp140Q6NSQ5 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sp140Q6NSQ5 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sp140Q6NSQ5 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sp140Q6NSQ5 Gm4899-201ENSMUST00000178708 719 ntBASIC15.25■□□□□ 0.03
Sp140Q6NSQ5 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.25■□□□□ 0.03
Sp140Q6NSQ5 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sp140Q6NSQ5 Gm10060-201ENSMUST00000212002 111 ntBASIC15.25■□□□□ 0.03
Sp140Q6NSQ5 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sp140Q6NSQ5 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sp140Q6NSQ5 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sp140Q6NSQ5 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sp140Q6NSQ5 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Sp140Q6NSQ5 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sp140Q6NSQ5 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sp140Q6NSQ5 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sp140Q6NSQ5 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sp140Q6NSQ5 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Sp140Q6NSQ5 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sp140Q6NSQ5 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sp140Q6NSQ5 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sp140Q6NSQ5 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Sp140Q6NSQ5 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Sp140Q6NSQ5 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Sp140Q6NSQ5 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sp140Q6NSQ5 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sp140Q6NSQ5 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.24■□□□□ 0.03
Sp140Q6NSQ5 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.24■□□□□ 0.03
Sp140Q6NSQ5 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms