Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhga7Q6DD96 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Pcdhga7Q6DD96 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhga7Q6DD96 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Pcdhga7Q6DD96 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Pcdhga7Q6DD96 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Pcdhga7Q6DD96 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.65□□□□□ -0.06
Pcdhga7Q6DD96 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhga7Q6DD96 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Pcdhga7Q6DD96 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.65□□□□□ -0.06
Pcdhga7Q6DD96 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhga7Q6DD96 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Pcdhga7Q6DD96 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhga7Q6DD96 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhga7Q6DD96 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhga7Q6DD96 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhga7Q6DD96 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Pcdhga7Q6DD96 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhga7Q6DD96 Gm27646-201ENSMUST00000183989 110 ntBASIC14.64□□□□□ -0.07
Pcdhga7Q6DD96 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.64□□□□□ -0.07
Pcdhga7Q6DD96 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhga7Q6DD96 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhga7Q6DD96 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhga7Q6DD96 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.64□□□□□ -0.07
Pcdhga7Q6DD96 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhga7Q6DD96 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhga7Q6DD96 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhga7Q6DD96 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhga7Q6DD96 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Pcdhga7Q6DD96 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Pcdhga7Q6DD96 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhga7Q6DD96 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.64□□□□□ -0.07
Pcdhga7Q6DD96 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.64□□□□□ -0.07
Pcdhga7Q6DD96 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhga7Q6DD96 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhga7Q6DD96 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Pcdhga7Q6DD96 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga7Q6DD96 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga7Q6DD96 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga7Q6DD96 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga7Q6DD96 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga7Q6DD96 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga7Q6DD96 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga7Q6DD96 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.63□□□□□ -0.07
Pcdhga7Q6DD96 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.63□□□□□ -0.07
Pcdhga7Q6DD96 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga7Q6DD96 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Pcdhga7Q6DD96 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Pcdhga7Q6DD96 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.63□□□□□ -0.07
Pcdhga7Q6DD96 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.63□□□□□ -0.07
Pcdhga7Q6DD96 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga7Q6DD96 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga7Q6DD96 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga7Q6DD96 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga7Q6DD96 Gm18669-201ENSMUST00000216049 778 ntBASIC14.63□□□□□ -0.07
Pcdhga7Q6DD96 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.63□□□□□ -0.07
Pcdhga7Q6DD96 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga7Q6DD96 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga7Q6DD96 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga7Q6DD96 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga7Q6DD96 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga7Q6DD96 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.63□□□□□ -0.07
Pcdhga7Q6DD96 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga7Q6DD96 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga7Q6DD96 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.63□□□□□ -0.07
Pcdhga7Q6DD96 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.63□□□□□ -0.07
Pcdhga7Q6DD96 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga7Q6DD96 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga7Q6DD96 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga7Q6DD96 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga7Q6DD96 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga7Q6DD96 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga7Q6DD96 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga7Q6DD96 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga7Q6DD96 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga7Q6DD96 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Pcdhga7Q6DD96 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga7Q6DD96 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga7Q6DD96 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga7Q6DD96 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga7Q6DD96 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga7Q6DD96 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga7Q6DD96 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga7Q6DD96 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga7Q6DD96 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga7Q6DD96 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Pcdhga7Q6DD96 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Pcdhga7Q6DD96 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdhga7Q6DD96 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.62□□□□□ -0.07
Pcdhga7Q6DD96 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdhga7Q6DD96 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga7Q6DD96 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.62□□□□□ -0.07
Pcdhga7Q6DD96 Gm6296-201ENSMUST00000222599 943 ntBASIC14.62□□□□□ -0.07
Pcdhga7Q6DD96 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.62□□□□□ -0.07
Pcdhga7Q6DD96 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
Pcdhga7Q6DD96 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga7Q6DD96 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga7Q6DD96 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga7Q6DD96 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga7Q6DD96 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms