Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Six4Q61321 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Six4Q61321 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Six4Q61321 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Six4Q61321 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Six4Q61321 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Six4Q61321 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Six4Q61321 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Six4Q61321 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Six4Q61321 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Six4Q61321 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Six4Q61321 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Six4Q61321 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Six4Q61321 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.16■□□□□ 0.02
Six4Q61321 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Six4Q61321 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Six4Q61321 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Six4Q61321 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Six4Q61321 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Six4Q61321 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Six4Q61321 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Six4Q61321 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Six4Q61321 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Six4Q61321 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Six4Q61321 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Six4Q61321 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.16■□□□□ 0.02
Six4Q61321 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Six4Q61321 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.16■□□□□ 0.02
Six4Q61321 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Six4Q61321 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Six4Q61321 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Six4Q61321 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Six4Q61321 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.16■□□□□ 0.02
Six4Q61321 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Six4Q61321 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Six4Q61321 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Six4Q61321 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Six4Q61321 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Six4Q61321 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Six4Q61321 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Six4Q61321 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Six4Q61321 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Six4Q61321 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Six4Q61321 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Six4Q61321 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Six4Q61321 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Six4Q61321 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Six4Q61321 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Six4Q61321 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Six4Q61321 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Six4Q61321 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Six4Q61321 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Six4Q61321 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Six4Q61321 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Six4Q61321 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Six4Q61321 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Six4Q61321 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.15■□□□□ 0.02
Six4Q61321 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Six4Q61321 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Six4Q61321 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Six4Q61321 Gm27301-201ENSMUST00000184012 127 ntBASIC15.15■□□□□ 0.02
Six4Q61321 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.15■□□□□ 0.02
Six4Q61321 Mir8117-201ENSMUST00000184773 107 ntBASIC15.15■□□□□ 0.02
Six4Q61321 Gm2272-201ENSMUST00000194903 582 ntBASIC15.15■□□□□ 0.02
Six4Q61321 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.15■□□□□ 0.02
Six4Q61321 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Six4Q61321 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Six4Q61321 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.15■□□□□ 0.02
Six4Q61321 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Six4Q61321 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Six4Q61321 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Six4Q61321 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Six4Q61321 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Six4Q61321 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Six4Q61321 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Six4Q61321 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Six4Q61321 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Six4Q61321 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Six4Q61321 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Six4Q61321 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Six4Q61321 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Six4Q61321 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Six4Q61321 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Six4Q61321 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Six4Q61321 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Six4Q61321 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Six4Q61321 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Six4Q61321 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Six4Q61321 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Six4Q61321 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Six4Q61321 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Six4Q61321 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.14■□□□□ 0.01
Six4Q61321 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.14■□□□□ 0.01
Six4Q61321 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.14■□□□□ 0.01
Six4Q61321 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Six4Q61321 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Six4Q61321 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Six4Q61321 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Six4Q61321 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Six4Q61321 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms