Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.24■□□□□ 0.35
Scnn1aQ61180 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scnn1aQ61180 Gm13464-201ENSMUST00000119418 935 ntBASIC17.24■□□□□ 0.35
Scnn1aQ61180 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Scnn1aQ61180 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Scnn1aQ61180 Gm27622-201ENSMUST00000183779 60 ntBASIC17.24■□□□□ 0.35
Scnn1aQ61180 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scnn1aQ61180 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Scnn1aQ61180 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Scnn1aQ61180 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scnn1aQ61180 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scnn1aQ61180 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Scnn1aQ61180 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scnn1aQ61180 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scnn1aQ61180 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scnn1aQ61180 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scnn1aQ61180 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scnn1aQ61180 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scnn1aQ61180 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scnn1aQ61180 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scnn1aQ61180 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scnn1aQ61180 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scnn1aQ61180 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scnn1aQ61180 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.23■□□□□ 0.35
Scnn1aQ61180 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scnn1aQ61180 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scnn1aQ61180 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scnn1aQ61180 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scnn1aQ61180 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scnn1aQ61180 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scnn1aQ61180 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scnn1aQ61180 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scnn1aQ61180 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scnn1aQ61180 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scnn1aQ61180 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scnn1aQ61180 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Scnn1aQ61180 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scnn1aQ61180 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scnn1aQ61180 Gm5479-201ENSMUST00000160578 435 ntBASIC17.23■□□□□ 0.35
Scnn1aQ61180 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Scnn1aQ61180 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC17.23■□□□□ 0.35
Scnn1aQ61180 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scnn1aQ61180 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Scnn1aQ61180 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scnn1aQ61180 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scnn1aQ61180 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scnn1aQ61180 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.23■□□□□ 0.35
Scnn1aQ61180 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scnn1aQ61180 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scnn1aQ61180 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scnn1aQ61180 Gm13517-201ENSMUST00000120782 1495 ntBASIC17.23■□□□□ 0.35
Scnn1aQ61180 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scnn1aQ61180 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC17.23■□□□□ 0.35
Scnn1aQ61180 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Scnn1aQ61180 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scnn1aQ61180 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scnn1aQ61180 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.22■□□□□ 0.35
Scnn1aQ61180 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scnn1aQ61180 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scnn1aQ61180 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scnn1aQ61180 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.22■□□□□ 0.35
Scnn1aQ61180 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Scnn1aQ61180 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scnn1aQ61180 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Scnn1aQ61180 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scnn1aQ61180 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scnn1aQ61180 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC17.22■□□□□ 0.35
Scnn1aQ61180 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC17.22■□□□□ 0.35
Scnn1aQ61180 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC17.22■□□□□ 0.35
Scnn1aQ61180 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC17.22■□□□□ 0.35
Scnn1aQ61180 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scnn1aQ61180 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC17.22■□□□□ 0.35
Scnn1aQ61180 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.22■□□□□ 0.35
Scnn1aQ61180 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC17.22■□□□□ 0.35
Scnn1aQ61180 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scnn1aQ61180 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scnn1aQ61180 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Scnn1aQ61180 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scnn1aQ61180 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Scnn1aQ61180 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scnn1aQ61180 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.22■□□□□ 0.35
Scnn1aQ61180 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scnn1aQ61180 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scnn1aQ61180 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scnn1aQ61180 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC17.22■□□□□ 0.35
Scnn1aQ61180 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.22■□□□□ 0.35
Scnn1aQ61180 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scnn1aQ61180 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scnn1aQ61180 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scnn1aQ61180 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scnn1aQ61180 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Scnn1aQ61180 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scnn1aQ61180 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scnn1aQ61180 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Scnn1aQ61180 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Scnn1aQ61180 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
Scnn1aQ61180 Gm6944-201ENSMUST00000182449 1006 ntBASIC17.21■□□□□ 0.35
Scnn1aQ61180 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.21■□□□□ 0.35
Scnn1aQ61180 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scnn1aQ61180 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms