Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Cln3Q61124 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC16.41■□□□□ 0.22
Cln3Q61124 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cln3Q61124 Gm6263-201ENSMUST00000120029 1342 ntBASIC16.41■□□□□ 0.22
Cln3Q61124 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cln3Q61124 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cln3Q61124 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Cln3Q61124 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cln3Q61124 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cln3Q61124 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cln3Q61124 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.4■□□□□ 0.22
Cln3Q61124 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cln3Q61124 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cln3Q61124 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cln3Q61124 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cln3Q61124 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cln3Q61124 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cln3Q61124 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Cln3Q61124 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cln3Q61124 Mir1897-201ENSMUST00000122581 272 ntBASIC16.4■□□□□ 0.22
Cln3Q61124 Cd63-ps-201ENSMUST00000145417 875 ntBASIC16.4■□□□□ 0.22
Cln3Q61124 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC16.4■□□□□ 0.22
Cln3Q61124 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cln3Q61124 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cln3Q61124 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cln3Q61124 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.4■□□□□ 0.22
Cln3Q61124 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cln3Q61124 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cln3Q61124 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cln3Q61124 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Cln3Q61124 Gm3365-201ENSMUST00000216296 1480 ntBASIC16.4■□□□□ 0.22
Cln3Q61124 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
Cln3Q61124 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Cln3Q61124 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Cln3Q61124 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cln3Q61124 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Cln3Q61124 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cln3Q61124 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cln3Q61124 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cln3Q61124 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Cln3Q61124 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cln3Q61124 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cln3Q61124 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Cln3Q61124 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cln3Q61124 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cln3Q61124 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Cln3Q61124 Gm4204-201ENSMUST00000110798 1231 ntBASIC16.39■□□□□ 0.21
Cln3Q61124 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Cln3Q61124 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC16.39■□□□□ 0.21
Cln3Q61124 Gm29667-201ENSMUST00000190817 490 ntBASIC16.39■□□□□ 0.21
Cln3Q61124 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cln3Q61124 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Cln3Q61124 Gm6218-201ENSMUST00000219812 628 ntBASIC16.39■□□□□ 0.21
Cln3Q61124 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cln3Q61124 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC16.39■□□□□ 0.21
Cln3Q61124 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cln3Q61124 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cln3Q61124 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.39■□□□□ 0.21
Cln3Q61124 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cln3Q61124 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cln3Q61124 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cln3Q61124 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cln3Q61124 Gm5320-201ENSMUST00000207163 1519 ntBASIC16.39■□□□□ 0.21
Cln3Q61124 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cln3Q61124 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.39■□□□□ 0.21
Cln3Q61124 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cln3Q61124 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cln3Q61124 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cln3Q61124 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cln3Q61124 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Cln3Q61124 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cln3Q61124 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cln3Q61124 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cln3Q61124 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC16.38■□□□□ 0.21
Cln3Q61124 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cln3Q61124 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cln3Q61124 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cln3Q61124 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC16.38■□□□□ 0.21
Cln3Q61124 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cln3Q61124 Prob1-201ENSMUST00000097619 3021 ntBASIC16.38■□□□□ 0.21
Cln3Q61124 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cln3Q61124 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cln3Q61124 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cln3Q61124 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cln3Q61124 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cln3Q61124 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cln3Q61124 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cln3Q61124 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cln3Q61124 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cln3Q61124 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cln3Q61124 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cln3Q61124 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.37■□□□□ 0.21
Cln3Q61124 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cln3Q61124 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cln3Q61124 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cln3Q61124 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cln3Q61124 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cln3Q61124 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cln3Q61124 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
Cln3Q61124 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms