Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col12a1Q60847 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col12a1Q60847 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC14.64□□□□□ -0.07
Col12a1Q60847 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.64□□□□□ -0.07
Col12a1Q60847 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.64□□□□□ -0.07
Col12a1Q60847 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.64□□□□□ -0.07
Col12a1Q60847 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Col12a1Q60847 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Col12a1Q60847 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Col12a1Q60847 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col12a1Q60847 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col12a1Q60847 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Col12a1Q60847 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col12a1Q60847 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.64□□□□□ -0.07
Col12a1Q60847 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col12a1Q60847 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Col12a1Q60847 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col12a1Q60847 Gm13350-201ENSMUST00000120519 479 ntBASIC14.64□□□□□ -0.07
Col12a1Q60847 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC14.64□□□□□ -0.07
Col12a1Q60847 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.64□□□□□ -0.07
Col12a1Q60847 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Col12a1Q60847 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col12a1Q60847 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Col12a1Q60847 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col12a1Q60847 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.64□□□□□ -0.07
Col12a1Q60847 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col12a1Q60847 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col12a1Q60847 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col12a1Q60847 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col12a1Q60847 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col12a1Q60847 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Col12a1Q60847 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col12a1Q60847 Gm7584-201ENSMUST00000175829 940 ntBASIC14.64□□□□□ -0.07
Col12a1Q60847 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.64□□□□□ -0.07
Col12a1Q60847 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.64□□□□□ -0.07
Col12a1Q60847 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.64□□□□□ -0.07
Col12a1Q60847 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col12a1Q60847 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col12a1Q60847 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Col12a1Q60847 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC14.63□□□□□ -0.07
Col12a1Q60847 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Col12a1Q60847 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Col12a1Q60847 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC14.63□□□□□ -0.07
Col12a1Q60847 Gm18054-201ENSMUST00000207539 555 ntBASIC14.63□□□□□ -0.07
Col12a1Q60847 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Col12a1Q60847 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col12a1Q60847 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col12a1Q60847 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Col12a1Q60847 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Col12a1Q60847 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.63□□□□□ -0.07
Col12a1Q60847 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col12a1Q60847 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col12a1Q60847 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.63□□□□□ -0.07
Col12a1Q60847 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col12a1Q60847 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col12a1Q60847 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col12a1Q60847 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col12a1Q60847 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col12a1Q60847 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col12a1Q60847 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Col12a1Q60847 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col12a1Q60847 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.62□□□□□ -0.07
Col12a1Q60847 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Col12a1Q60847 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.62□□□□□ -0.07
Col12a1Q60847 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col12a1Q60847 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col12a1Q60847 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col12a1Q60847 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col12a1Q60847 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Col12a1Q60847 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Col12a1Q60847 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col12a1Q60847 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col12a1Q60847 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Col12a1Q60847 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col12a1Q60847 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Col12a1Q60847 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col12a1Q60847 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.62□□□□□ -0.07
Col12a1Q60847 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col12a1Q60847 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col12a1Q60847 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col12a1Q60847 Gm5940-201ENSMUST00000117582 1068 ntBASIC14.61□□□□□ -0.07
Col12a1Q60847 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC14.61□□□□□ -0.07
Col12a1Q60847 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC14.61□□□□□ -0.07
Col12a1Q60847 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col12a1Q60847 Gm7399-201ENSMUST00000032395 858 ntBASIC14.61□□□□□ -0.07
Col12a1Q60847 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Col12a1Q60847 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC14.61□□□□□ -0.07
Col12a1Q60847 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Col12a1Q60847 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col12a1Q60847 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col12a1Q60847 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Col12a1Q60847 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col12a1Q60847 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC14.61□□□□□ -0.07
Col12a1Q60847 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col12a1Q60847 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col12a1Q60847 Gm10012-201ENSMUST00000078252 192 ntBASIC14.61□□□□□ -0.07
Col12a1Q60847 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col12a1Q60847 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
Col12a1Q60847 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col12a1Q60847 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms