Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nr1h4Q60641 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nr1h4Q60641 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Nr1h4Q60641 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nr1h4Q60641 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Nr1h4Q60641 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Nr1h4Q60641 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Nr1h4Q60641 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nr1h4Q60641 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.33□□□□□ -0.11
Nr1h4Q60641 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Nr1h4Q60641 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nr1h4Q60641 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Nr1h4Q60641 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nr1h4Q60641 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1h4Q60641 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1h4Q60641 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1h4Q60641 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.33□□□□□ -0.12
Nr1h4Q60641 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1h4Q60641 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1h4Q60641 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1h4Q60641 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1h4Q60641 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1h4Q60641 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1h4Q60641 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Nr1h4Q60641 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Nr1h4Q60641 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Nr1h4Q60641 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Nr1h4Q60641 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.33□□□□□ -0.12
Nr1h4Q60641 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1h4Q60641 Gm25745-201ENSMUST00000174945 133 ntBASIC14.33□□□□□ -0.12
Nr1h4Q60641 Gm23634-201ENSMUST00000175071 91 ntBASIC14.33□□□□□ -0.12
Nr1h4Q60641 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Nr1h4Q60641 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.33□□□□□ -0.12
Nr1h4Q60641 Gm27742-201ENSMUST00000184667 60 ntBASIC14.33□□□□□ -0.12
Nr1h4Q60641 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Nr1h4Q60641 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1h4Q60641 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.33□□□□□ -0.12
Nr1h4Q60641 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1h4Q60641 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1h4Q60641 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1h4Q60641 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1h4Q60641 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1h4Q60641 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1h4Q60641 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1h4Q60641 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Nr1h4Q60641 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1h4Q60641 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1h4Q60641 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1h4Q60641 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Nr1h4Q60641 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h4Q60641 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h4Q60641 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h4Q60641 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h4Q60641 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h4Q60641 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h4Q60641 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h4Q60641 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.32□□□□□ -0.12
Nr1h4Q60641 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.32□□□□□ -0.12
Nr1h4Q60641 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.32□□□□□ -0.12
Nr1h4Q60641 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h4Q60641 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h4Q60641 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h4Q60641 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h4Q60641 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h4Q60641 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h4Q60641 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.32□□□□□ -0.12
Nr1h4Q60641 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.32□□□□□ -0.12
Nr1h4Q60641 AA414768-201ENSMUST00000121924 1257 ntBASIC14.32□□□□□ -0.12
Nr1h4Q60641 Olfr129-201ENSMUST00000122318 993 ntBASIC14.32□□□□□ -0.12
Nr1h4Q60641 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Nr1h4Q60641 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Nr1h4Q60641 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Nr1h4Q60641 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.32□□□□□ -0.12
Nr1h4Q60641 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h4Q60641 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h4Q60641 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h4Q60641 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h4Q60641 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h4Q60641 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h4Q60641 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h4Q60641 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h4Q60641 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.32□□□□□ -0.12
Nr1h4Q60641 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.32□□□□□ -0.12
Nr1h4Q60641 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h4Q60641 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h4Q60641 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h4Q60641 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h4Q60641 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Nr1h4Q60641 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h4Q60641 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.32□□□□□ -0.12
Nr1h4Q60641 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h4Q60641 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
Nr1h4Q60641 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h4Q60641 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Nr1h4Q60641 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Nr1h4Q60641 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h4Q60641 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h4Q60641 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Nr1h4Q60641 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nr1h4Q60641 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms