Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-4Q5R1I0 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav6d-4Q5R1I0 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-4Q5R1I0 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-4Q5R1I0 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-4Q5R1I0 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-4Q5R1I0 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-4Q5R1I0 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-4Q5R1I0 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-4Q5R1I0 Mir1895-201ENSMUST00000122615 79 ntBASIC12.63□□□□□ -0.39
Trav6d-4Q5R1I0 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-4Q5R1I0 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav6d-4Q5R1I0 Gm27494-201ENSMUST00000184735 189 ntBASIC12.63□□□□□ -0.39
Trav6d-4Q5R1I0 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-4Q5R1I0 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trav6d-4Q5R1I0 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-4Q5R1I0 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-4Q5R1I0 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-4Q5R1I0 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-4Q5R1I0 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-4Q5R1I0 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-4Q5R1I0 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-4Q5R1I0 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trav6d-4Q5R1I0 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Trav6d-4Q5R1I0 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-4Q5R1I0 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC12.63□□□□□ -0.39
Trav6d-4Q5R1I0 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.63□□□□□ -0.39
Trav6d-4Q5R1I0 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-4Q5R1I0 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-4Q5R1I0 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-4Q5R1I0 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav6d-4Q5R1I0 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav6d-4Q5R1I0 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Trav6d-4Q5R1I0 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav6d-4Q5R1I0 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.62□□□□□ -0.39
Trav6d-4Q5R1I0 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-4Q5R1I0 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-4Q5R1I0 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-4Q5R1I0 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-4Q5R1I0 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-4Q5R1I0 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-4Q5R1I0 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-4Q5R1I0 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Trav6d-4Q5R1I0 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-4Q5R1I0 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav6d-4Q5R1I0 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav6d-4Q5R1I0 Gm26308-201ENSMUST00000157768 69 ntBASIC12.62□□□□□ -0.39
Trav6d-4Q5R1I0 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.62□□□□□ -0.39
Trav6d-4Q5R1I0 Rpph1-201ENSMUST00000175096 319 ntBASIC12.62□□□□□ -0.39
Trav6d-4Q5R1I0 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-4Q5R1I0 Gm45612-201ENSMUST00000211320 160 ntBASIC12.62□□□□□ -0.39
Trav6d-4Q5R1I0 Chchd1-203ENSMUST00000224633 557 ntBASIC12.62□□□□□ -0.39
Trav6d-4Q5R1I0 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.62□□□□□ -0.39
Trav6d-4Q5R1I0 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-4Q5R1I0 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-4Q5R1I0 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav6d-4Q5R1I0 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-4Q5R1I0 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav6d-4Q5R1I0 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav6d-4Q5R1I0 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-4Q5R1I0 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-4Q5R1I0 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-4Q5R1I0 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-4Q5R1I0 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-4Q5R1I0 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-4Q5R1I0 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-4Q5R1I0 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-4Q5R1I0 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-4Q5R1I0 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-4Q5R1I0 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-4Q5R1I0 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-4Q5R1I0 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-4Q5R1I0 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-4Q5R1I0 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav6d-4Q5R1I0 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-4Q5R1I0 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav6d-4Q5R1I0 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-4Q5R1I0 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-4Q5R1I0 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-4Q5R1I0 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-4Q5R1I0 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-4Q5R1I0 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav6d-4Q5R1I0 Gm20553-201ENSMUST00000204205 844 ntBASIC12.61□□□□□ -0.39
Trav6d-4Q5R1I0 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.61□□□□□ -0.39
Trav6d-4Q5R1I0 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.61□□□□□ -0.39
Trav6d-4Q5R1I0 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-4Q5R1I0 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-4Q5R1I0 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.61□□□□□ -0.39
Trav6d-4Q5R1I0 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-4Q5R1I0 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-4Q5R1I0 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-4Q5R1I0 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-4Q5R1I0 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav6d-4Q5R1I0 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-4Q5R1I0 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-4Q5R1I0 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-4Q5R1I0 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Trav6d-4Q5R1I0 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-4Q5R1I0 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-4Q5R1I0 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms