Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8d-1Q5R1H8 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8d-1Q5R1H8 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8d-1Q5R1H8 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8d-1Q5R1H8 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8d-1Q5R1H8 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8d-1Q5R1H8 Gm27742-201ENSMUST00000184667 60 ntBASIC12.37□□□□□ -0.43
Trav8d-1Q5R1H8 Gm44430-201ENSMUST00000203376 995 ntBASIC12.37□□□□□ -0.43
Trav8d-1Q5R1H8 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8d-1Q5R1H8 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8d-1Q5R1H8 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trav8d-1Q5R1H8 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trav8d-1Q5R1H8 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8d-1Q5R1H8 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8d-1Q5R1H8 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8d-1Q5R1H8 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8d-1Q5R1H8 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8d-1Q5R1H8 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8d-1Q5R1H8 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8d-1Q5R1H8 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8d-1Q5R1H8 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8d-1Q5R1H8 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8d-1Q5R1H8 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8d-1Q5R1H8 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8d-1Q5R1H8 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8d-1Q5R1H8 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8d-1Q5R1H8 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8d-1Q5R1H8 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8d-1Q5R1H8 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav8d-1Q5R1H8 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Trav8d-1Q5R1H8 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Trav8d-1Q5R1H8 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav8d-1Q5R1H8 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav8d-1Q5R1H8 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav8d-1Q5R1H8 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav8d-1Q5R1H8 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav8d-1Q5R1H8 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav8d-1Q5R1H8 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav8d-1Q5R1H8 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav8d-1Q5R1H8 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Trav8d-1Q5R1H8 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav8d-1Q5R1H8 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav8d-1Q5R1H8 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav8d-1Q5R1H8 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC12.36□□□□□ -0.43
Trav8d-1Q5R1H8 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav8d-1Q5R1H8 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav8d-1Q5R1H8 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav8d-1Q5R1H8 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.36□□□□□ -0.43
Trav8d-1Q5R1H8 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav8d-1Q5R1H8 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav8d-1Q5R1H8 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav8d-1Q5R1H8 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Trav8d-1Q5R1H8 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav8d-1Q5R1H8 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav8d-1Q5R1H8 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav8d-1Q5R1H8 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8d-1Q5R1H8 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8d-1Q5R1H8 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.35□□□□□ -0.43
Trav8d-1Q5R1H8 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8d-1Q5R1H8 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8d-1Q5R1H8 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8d-1Q5R1H8 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8d-1Q5R1H8 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.35□□□□□ -0.43
Trav8d-1Q5R1H8 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8d-1Q5R1H8 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8d-1Q5R1H8 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8d-1Q5R1H8 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8d-1Q5R1H8 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8d-1Q5R1H8 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav8d-1Q5R1H8 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8d-1Q5R1H8 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8d-1Q5R1H8 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Trav8d-1Q5R1H8 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Trav8d-1Q5R1H8 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8d-1Q5R1H8 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8d-1Q5R1H8 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.35□□□□□ -0.43
Trav8d-1Q5R1H8 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.35□□□□□ -0.43
Trav8d-1Q5R1H8 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Trav8d-1Q5R1H8 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.35□□□□□ -0.43
Trav8d-1Q5R1H8 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8d-1Q5R1H8 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8d-1Q5R1H8 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8d-1Q5R1H8 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8d-1Q5R1H8 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8d-1Q5R1H8 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8d-1Q5R1H8 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8d-1Q5R1H8 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav8d-1Q5R1H8 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav8d-1Q5R1H8 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8d-1Q5R1H8 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.35□□□□□ -0.43
Trav8d-1Q5R1H8 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8d-1Q5R1H8 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8d-1Q5R1H8 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8d-1Q5R1H8 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8d-1Q5R1H8 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav8d-1Q5R1H8 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8d-1Q5R1H8 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav8d-1Q5R1H8 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav8d-1Q5R1H8 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.34□□□□□ -0.43
Trav8d-1Q5R1H8 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms