Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav8d-2Q5R1B6 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8d-2Q5R1B6 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8d-2Q5R1B6 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8d-2Q5R1B6 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.57□□□□□ -0.08
Trav8d-2Q5R1B6 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8d-2Q5R1B6 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.57□□□□□ -0.08
Trav8d-2Q5R1B6 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8d-2Q5R1B6 Gm37917-201ENSMUST00000194711 392 ntBASIC14.57□□□□□ -0.08
Trav8d-2Q5R1B6 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.57□□□□□ -0.08
Trav8d-2Q5R1B6 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.57□□□□□ -0.08
Trav8d-2Q5R1B6 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8d-2Q5R1B6 AC153962.4-201ENSMUST00000217878 242 ntBASIC14.57□□□□□ -0.08
Trav8d-2Q5R1B6 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.57□□□□□ -0.08
Trav8d-2Q5R1B6 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.57□□□□□ -0.08
Trav8d-2Q5R1B6 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8d-2Q5R1B6 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.57□□□□□ -0.08
Trav8d-2Q5R1B6 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8d-2Q5R1B6 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8d-2Q5R1B6 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8d-2Q5R1B6 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8d-2Q5R1B6 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8d-2Q5R1B6 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8d-2Q5R1B6 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8d-2Q5R1B6 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav8d-2Q5R1B6 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8d-2Q5R1B6 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8d-2Q5R1B6 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8d-2Q5R1B6 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8d-2Q5R1B6 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8d-2Q5R1B6 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav8d-2Q5R1B6 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8d-2Q5R1B6 Gm15824-201ENSMUST00000119516 955 ntBASIC14.56□□□□□ -0.08
Trav8d-2Q5R1B6 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.56□□□□□ -0.08
Trav8d-2Q5R1B6 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8d-2Q5R1B6 Gm9522-201ENSMUST00000182394 926 ntBASIC14.56□□□□□ -0.08
Trav8d-2Q5R1B6 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.56□□□□□ -0.08
Trav8d-2Q5R1B6 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8d-2Q5R1B6 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8d-2Q5R1B6 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trav8d-2Q5R1B6 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8d-2Q5R1B6 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8d-2Q5R1B6 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav8d-2Q5R1B6 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8d-2Q5R1B6 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8d-2Q5R1B6 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8d-2Q5R1B6 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8d-2Q5R1B6 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8d-2Q5R1B6 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Gm29310-201ENSMUST00000185468 696 ntBASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Gm21825-201ENSMUST00000185728 696 ntBASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Gm29109-201ENSMUST00000185895 696 ntBASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Gm21896-201ENSMUST00000186520 696 ntBASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Gm21873-201ENSMUST00000186728 696 ntBASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Gm21794-201ENSMUST00000187056 696 ntBASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Gm21880-201ENSMUST00000187275 696 ntBASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Gm21826-201ENSMUST00000187451 696 ntBASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Gm21198-201ENSMUST00000188393 696 ntBASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Gm21749-201ENSMUST00000189343 696 ntBASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Gm21901-201ENSMUST00000189568 696 ntBASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Gm29424-201ENSMUST00000189716 696 ntBASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Gm28599-201ENSMUST00000189838 694 ntBASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Gm21867-201ENSMUST00000189917 696 ntBASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Gm29269-201ENSMUST00000190087 696 ntBASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Gm21722-201ENSMUST00000190153 696 ntBASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Gm28423-201ENSMUST00000190701 696 ntBASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Gm21899-201ENSMUST00000190745 696 ntBASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Gm21910-201ENSMUST00000191163 696 ntBASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Gm21849-201ENSMUST00000191571 696 ntBASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Gm28678-201ENSMUST00000191593 696 ntBASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Gm20910-201ENSMUST00000193268 696 ntBASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Gm21871-201ENSMUST00000194621 696 ntBASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Gm44719-201ENSMUST00000206404 149 ntBASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms