Protein–RNA interactions for Protein: Q5R1A3

Trdv4, T cell receptor delta variable 4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv4Q5R1A3 AC147366.1-201ENSMUST00000227671 852 ntBASIC12.43□□□□□ -0.42
Trdv4Q5R1A3 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trdv4Q5R1A3 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trdv4Q5R1A3 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trdv4Q5R1A3 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trdv4Q5R1A3 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trdv4Q5R1A3 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Trdv4Q5R1A3 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trdv4Q5R1A3 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trdv4Q5R1A3 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trdv4Q5R1A3 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trdv4Q5R1A3 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trdv4Q5R1A3 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trdv4Q5R1A3 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trdv4Q5R1A3 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trdv4Q5R1A3 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trdv4Q5R1A3 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdv4Q5R1A3 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Trdv4Q5R1A3 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdv4Q5R1A3 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trdv4Q5R1A3 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdv4Q5R1A3 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdv4Q5R1A3 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.42□□□□□ -0.42
Trdv4Q5R1A3 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.42□□□□□ -0.42
Trdv4Q5R1A3 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdv4Q5R1A3 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdv4Q5R1A3 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.42□□□□□ -0.42
Trdv4Q5R1A3 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdv4Q5R1A3 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdv4Q5R1A3 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trdv4Q5R1A3 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.42□□□□□ -0.42
Trdv4Q5R1A3 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC12.42□□□□□ -0.42
Trdv4Q5R1A3 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trdv4Q5R1A3 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12.42□□□□□ -0.42
Trdv4Q5R1A3 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC12.42□□□□□ -0.42
Trdv4Q5R1A3 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trdv4Q5R1A3 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
Trdv4Q5R1A3 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.42□□□□□ -0.42
Trdv4Q5R1A3 AV026068-213ENSMUST00000223675 1171 ntBASIC12.42□□□□□ -0.42
Trdv4Q5R1A3 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdv4Q5R1A3 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trdv4Q5R1A3 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdv4Q5R1A3 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdv4Q5R1A3 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.42□□□□□ -0.42
Trdv4Q5R1A3 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdv4Q5R1A3 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trdv4Q5R1A3 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.42□□□□□ -0.42
Trdv4Q5R1A3 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trdv4Q5R1A3 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdv4Q5R1A3 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trdv4Q5R1A3 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trdv4Q5R1A3 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Trdv4Q5R1A3 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trdv4Q5R1A3 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdv4Q5R1A3 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv4Q5R1A3 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trdv4Q5R1A3 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv4Q5R1A3 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv4Q5R1A3 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv4Q5R1A3 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv4Q5R1A3 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv4Q5R1A3 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv4Q5R1A3 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv4Q5R1A3 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv4Q5R1A3 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv4Q5R1A3 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv4Q5R1A3 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv4Q5R1A3 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv4Q5R1A3 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Trdv4Q5R1A3 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trdv4Q5R1A3 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.41□□□□□ -0.42
Trdv4Q5R1A3 Gm7787-201ENSMUST00000216858 688 ntBASIC12.41□□□□□ -0.42
Trdv4Q5R1A3 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.41□□□□□ -0.42
Trdv4Q5R1A3 Celf4-206ENSMUST00000224553 1729 ntBASIC12.41□□□□□ -0.42
Trdv4Q5R1A3 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trdv4Q5R1A3 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv4Q5R1A3 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv4Q5R1A3 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv4Q5R1A3 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv4Q5R1A3 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv4Q5R1A3 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trdv4Q5R1A3 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv4Q5R1A3 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv4Q5R1A3 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.41□□□□□ -0.42
Trdv4Q5R1A3 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trdv4Q5R1A3 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv4Q5R1A3 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv4Q5R1A3 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv4Q5R1A3 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv4Q5R1A3 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv4Q5R1A3 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Trdv4Q5R1A3 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv4Q5R1A3 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv4Q5R1A3 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv4Q5R1A3 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv4Q5R1A3 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv4Q5R1A3 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv4Q5R1A3 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv4Q5R1A3 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv4Q5R1A3 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms