Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rc3h1Q4VGL6 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rc3h1Q4VGL6 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rc3h1Q4VGL6 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rc3h1Q4VGL6 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rc3h1Q4VGL6 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rc3h1Q4VGL6 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Rc3h1Q4VGL6 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Rc3h1Q4VGL6 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Rc3h1Q4VGL6 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rc3h1Q4VGL6 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rc3h1Q4VGL6 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rc3h1Q4VGL6 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rc3h1Q4VGL6 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rc3h1Q4VGL6 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rc3h1Q4VGL6 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Rc3h1Q4VGL6 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.33■□□□□ 0.37
Rc3h1Q4VGL6 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rc3h1Q4VGL6 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Fgf17-202ENSMUST00000227123 1336 ntBASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Gm22065-201ENSMUST00000103753 110 ntBASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Gm22066-201ENSMUST00000103761 110 ntBASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Gm24932-201ENSMUST00000103763 110 ntBASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Gm24115-201ENSMUST00000103799 110 ntBASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Gm22190-201ENSMUST00000103827 110 ntBASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Gm22191-201ENSMUST00000103831 110 ntBASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Gm24721-201ENSMUST00000103849 110 ntBASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Gm28018-201ENSMUST00000103869 110 ntBASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Gm26399-201ENSMUST00000103937 110 ntBASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Gm25349-201ENSMUST00000177728 110 ntBASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Gm23616-201ENSMUST00000177797 110 ntBASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Gm25871-201ENSMUST00000177816 110 ntBASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Gm24752-201ENSMUST00000178240 110 ntBASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Gm24496-201ENSMUST00000178287 110 ntBASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Gm25649-201ENSMUST00000178476 110 ntBASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Gm25548-201ENSMUST00000178681 110 ntBASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Gm23147-201ENSMUST00000178841 110 ntBASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Gm26095-201ENSMUST00000179270 110 ntBASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Gm22171-201ENSMUST00000179283 110 ntBASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Gm23936-201ENSMUST00000179354 110 ntBASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Gm22619-201ENSMUST00000179516 110 ntBASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Gm25255-201ENSMUST00000179579 110 ntBASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Gm24755-201ENSMUST00000179691 110 ntBASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Gm26506-201ENSMUST00000179692 110 ntBASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Gm25086-201ENSMUST00000179931 110 ntBASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Gm23243-201ENSMUST00000180047 110 ntBASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Gm24659-201ENSMUST00000180212 110 ntBASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Gm24169-201ENSMUST00000180244 110 ntBASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Gm23689-201ENSMUST00000180354 110 ntBASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Gm27359-201ENSMUST00000184153 110 ntBASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Gm27785-201ENSMUST00000184268 110 ntBASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Gm27466-201ENSMUST00000184396 110 ntBASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Gm27703-201ENSMUST00000184836 110 ntBASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rc3h1Q4VGL6 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rc3h1Q4VGL6 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rc3h1Q4VGL6 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rc3h1Q4VGL6 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rc3h1Q4VGL6 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rc3h1Q4VGL6 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rc3h1Q4VGL6 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rc3h1Q4VGL6 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.32■□□□□ 0.36
Rc3h1Q4VGL6 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.32■□□□□ 0.36
Rc3h1Q4VGL6 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rc3h1Q4VGL6 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rc3h1Q4VGL6 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rc3h1Q4VGL6 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC17.32■□□□□ 0.36
Rc3h1Q4VGL6 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rc3h1Q4VGL6 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC17.32■□□□□ 0.36
Rc3h1Q4VGL6 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.32■□□□□ 0.36
Rc3h1Q4VGL6 Gm10576-201ENSMUST00000191927 825 ntBASIC17.32■□□□□ 0.36
Rc3h1Q4VGL6 Klk2-ps-201ENSMUST00000205342 571 ntBASIC17.32■□□□□ 0.36
Rc3h1Q4VGL6 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.32■□□□□ 0.36
Rc3h1Q4VGL6 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rc3h1Q4VGL6 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rc3h1Q4VGL6 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms