Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Fam196aQ3USH1 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Fam196aQ3USH1 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Fam196aQ3USH1 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC15.03■□□□□ -0
Fam196aQ3USH1 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.03■□□□□ -0
Fam196aQ3USH1 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC15.03■□□□□ -0
Fam196aQ3USH1 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC15.03■□□□□ -0
Fam196aQ3USH1 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC15.03■□□□□ -0
Fam196aQ3USH1 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.03■□□□□ -0
Fam196aQ3USH1 Gm16476-201ENSMUST00000221544 139 ntBASIC15.03■□□□□ -0
Fam196aQ3USH1 AC159006.1-201ENSMUST00000226396 258 ntBASIC15.03■□□□□ -0
Fam196aQ3USH1 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.03■□□□□ -0
Fam196aQ3USH1 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.03■□□□□ -0
Fam196aQ3USH1 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Fam196aQ3USH1 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Fam196aQ3USH1 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.03■□□□□ -0
Fam196aQ3USH1 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Fam196aQ3USH1 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Fam196aQ3USH1 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Fam196aQ3USH1 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Fam196aQ3USH1 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Fam196aQ3USH1 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.03■□□□□ -0
Fam196aQ3USH1 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Fam196aQ3USH1 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Fam196aQ3USH1 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.03■□□□□ -0
Fam196aQ3USH1 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Fam196aQ3USH1 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Fam196aQ3USH1 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.02■□□□□ -0
Fam196aQ3USH1 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
Fam196aQ3USH1 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC15.02■□□□□ -0
Fam196aQ3USH1 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Fam196aQ3USH1 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Fam196aQ3USH1 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Fam196aQ3USH1 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.02■□□□□ -0
Fam196aQ3USH1 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Fam196aQ3USH1 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
Fam196aQ3USH1 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Fam196aQ3USH1 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC15.02■□□□□ -0
Fam196aQ3USH1 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC15.02■□□□□ -0
Fam196aQ3USH1 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC15.02■□□□□ -0
Fam196aQ3USH1 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC15.02■□□□□ -0
Fam196aQ3USH1 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC15.02■□□□□ -0
Fam196aQ3USH1 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC15.02■□□□□ -0
Fam196aQ3USH1 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Fam196aQ3USH1 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC15.02■□□□□ -0
Fam196aQ3USH1 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC15.02■□□□□ -0
Fam196aQ3USH1 CT030657.3-201ENSMUST00000222707 1200 ntBASIC15.02■□□□□ -0
Fam196aQ3USH1 Dupd1-202ENSMUST00000224735 548 ntBASIC15.02■□□□□ -0
Fam196aQ3USH1 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Fam196aQ3USH1 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Fam196aQ3USH1 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Fam196aQ3USH1 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Fam196aQ3USH1 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Fam196aQ3USH1 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Fam196aQ3USH1 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Fam196aQ3USH1 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Fam196aQ3USH1 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Fam196aQ3USH1 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
Fam196aQ3USH1 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Fam196aQ3USH1 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Fam196aQ3USH1 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Fam196aQ3USH1 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Fam196aQ3USH1 Gm9200-201ENSMUST00000118513 1354 ntBASIC15.01□□□□□ -0.01
Fam196aQ3USH1 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Fam196aQ3USH1 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Fam196aQ3USH1 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Fam196aQ3USH1 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Fam196aQ3USH1 AC114008.2-201ENSMUST00000227699 1347 ntBASIC15.01□□□□□ -0.01
Fam196aQ3USH1 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Fam196aQ3USH1 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Fam196aQ3USH1 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Fam196aQ3USH1 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Fam196aQ3USH1 Gm21854-201ENSMUST00000179901 471 ntBASIC15.01□□□□□ -0.01
Fam196aQ3USH1 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC15.01□□□□□ -0.01
Fam196aQ3USH1 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC15.01□□□□□ -0.01
Fam196aQ3USH1 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC15.01□□□□□ -0.01
Fam196aQ3USH1 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC15.01□□□□□ -0.01
Fam196aQ3USH1 Gm19220-201ENSMUST00000222682 803 ntBASIC15.01□□□□□ -0.01
Fam196aQ3USH1 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Fam196aQ3USH1 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Fam196aQ3USH1 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Fam196aQ3USH1 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Fam196aQ3USH1 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Fam196aQ3USH1 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Fam196aQ3USH1 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Fam196aQ3USH1 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15□□□□□ -0.01
Fam196aQ3USH1 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15□□□□□ -0.01
Fam196aQ3USH1 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Fam196aQ3USH1 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15□□□□□ -0.01
Fam196aQ3USH1 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15□□□□□ -0.01
Fam196aQ3USH1 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Fam196aQ3USH1 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Fam196aQ3USH1 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Fam196aQ3USH1 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Fam196aQ3USH1 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Fam196aQ3USH1 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Fam196aQ3USH1 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Fam196aQ3USH1 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Fam196aQ3USH1 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15□□□□□ -0.01
Fam196aQ3USH1 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms