Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lins1Q3U1D0 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Lins1Q3U1D0 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lins1Q3U1D0 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lins1Q3U1D0 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Lins1Q3U1D0 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lins1Q3U1D0 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Lins1Q3U1D0 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Lins1Q3U1D0 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lins1Q3U1D0 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lins1Q3U1D0 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lins1Q3U1D0 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Lins1Q3U1D0 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lins1Q3U1D0 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lins1Q3U1D0 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.88■□□□□ 0.45
Lins1Q3U1D0 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lins1Q3U1D0 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
Lins1Q3U1D0 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Lins1Q3U1D0 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lins1Q3U1D0 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Lins1Q3U1D0 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.88■□□□□ 0.45
Lins1Q3U1D0 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lins1Q3U1D0 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lins1Q3U1D0 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.87■□□□□ 0.45
Lins1Q3U1D0 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lins1Q3U1D0 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Lins1Q3U1D0 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.87■□□□□ 0.45
Lins1Q3U1D0 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC17.87■□□□□ 0.45
Lins1Q3U1D0 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lins1Q3U1D0 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Lins1Q3U1D0 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC17.87■□□□□ 0.45
Lins1Q3U1D0 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Lins1Q3U1D0 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lins1Q3U1D0 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lins1Q3U1D0 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lins1Q3U1D0 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Lins1Q3U1D0 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.87■□□□□ 0.45
Lins1Q3U1D0 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lins1Q3U1D0 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lins1Q3U1D0 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Lins1Q3U1D0 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lins1Q3U1D0 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lins1Q3U1D0 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Lins1Q3U1D0 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lins1Q3U1D0 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lins1Q3U1D0 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.86■□□□□ 0.45
Lins1Q3U1D0 Gm22175-201ENSMUST00000175007 78 ntBASIC17.86■□□□□ 0.45
Lins1Q3U1D0 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.86■□□□□ 0.45
Lins1Q3U1D0 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.86■□□□□ 0.45
Lins1Q3U1D0 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lins1Q3U1D0 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Lins1Q3U1D0 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Lins1Q3U1D0 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lins1Q3U1D0 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Lins1Q3U1D0 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lins1Q3U1D0 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
Lins1Q3U1D0 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Lins1Q3U1D0 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lins1Q3U1D0 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lins1Q3U1D0 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lins1Q3U1D0 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lins1Q3U1D0 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lins1Q3U1D0 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Lins1Q3U1D0 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lins1Q3U1D0 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lins1Q3U1D0 Gm25287-201ENSMUST00000103846 110 ntBASIC17.85■□□□□ 0.45
Lins1Q3U1D0 Gm22918-201ENSMUST00000103855 110 ntBASIC17.85■□□□□ 0.45
Lins1Q3U1D0 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.85■□□□□ 0.45
Lins1Q3U1D0 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lins1Q3U1D0 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.85■□□□□ 0.45
Lins1Q3U1D0 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC17.85■□□□□ 0.45
Lins1Q3U1D0 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.85■□□□□ 0.45
Lins1Q3U1D0 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Lins1Q3U1D0 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Lins1Q3U1D0 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lins1Q3U1D0 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.85■□□□□ 0.45
Lins1Q3U1D0 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.85■□□□□ 0.45
Lins1Q3U1D0 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lins1Q3U1D0 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lins1Q3U1D0 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lins1Q3U1D0 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Lins1Q3U1D0 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lins1Q3U1D0 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lins1Q3U1D0 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Lins1Q3U1D0 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lins1Q3U1D0 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Lins1Q3U1D0 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lins1Q3U1D0 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lins1Q3U1D0 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lins1Q3U1D0 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Lins1Q3U1D0 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
Lins1Q3U1D0 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lins1Q3U1D0 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.84■□□□□ 0.45
Lins1Q3U1D0 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Lins1Q3U1D0 Mir7023-201ENSMUST00000185093 64 ntBASIC17.84■□□□□ 0.45
Lins1Q3U1D0 Gm10253-201ENSMUST00000194270 940 ntBASIC17.84■□□□□ 0.45
Lins1Q3U1D0 Gm7774-201ENSMUST00000200064 533 ntBASIC17.84■□□□□ 0.45
Lins1Q3U1D0 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.84■□□□□ 0.45
Lins1Q3U1D0 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Lins1Q3U1D0 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms