Protein–RNA interactions for Protein: Q1XH17

Trim72, Tripartite motif-containing protein 72, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim72Q1XH17 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trim72Q1XH17 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.05■□□□□ 0.16
Trim72Q1XH17 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim72Q1XH17 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim72Q1XH17 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim72Q1XH17 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim72Q1XH17 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim72Q1XH17 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim72Q1XH17 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim72Q1XH17 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim72Q1XH17 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Trim72Q1XH17 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim72Q1XH17 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim72Q1XH17 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trim72Q1XH17 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim72Q1XH17 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
Trim72Q1XH17 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim72Q1XH17 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim72Q1XH17 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.04■□□□□ 0.16
Trim72Q1XH17 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim72Q1XH17 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim72Q1XH17 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim72Q1XH17 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.04■□□□□ 0.16
Trim72Q1XH17 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim72Q1XH17 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim72Q1XH17 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Trim72Q1XH17 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Trim72Q1XH17 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16.04■□□□□ 0.16
Trim72Q1XH17 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim72Q1XH17 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim72Q1XH17 Gm12008-201ENSMUST00000117791 755 ntBASIC16.04■□□□□ 0.16
Trim72Q1XH17 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.04■□□□□ 0.16
Trim72Q1XH17 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC16.04■□□□□ 0.16
Trim72Q1XH17 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.04■□□□□ 0.16
Trim72Q1XH17 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.04■□□□□ 0.16
Trim72Q1XH17 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.04■□□□□ 0.16
Trim72Q1XH17 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim72Q1XH17 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim72Q1XH17 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim72Q1XH17 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim72Q1XH17 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim72Q1XH17 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim72Q1XH17 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim72Q1XH17 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim72Q1XH17 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim72Q1XH17 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
Trim72Q1XH17 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trim72Q1XH17 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim72Q1XH17 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim72Q1XH17 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim72Q1XH17 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
Trim72Q1XH17 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.03■□□□□ 0.16
Trim72Q1XH17 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim72Q1XH17 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim72Q1XH17 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim72Q1XH17 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim72Q1XH17 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim72Q1XH17 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim72Q1XH17 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
Trim72Q1XH17 Gm14140-201ENSMUST00000119999 995 ntBASIC16.03■□□□□ 0.16
Trim72Q1XH17 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.03■□□□□ 0.16
Trim72Q1XH17 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.03■□□□□ 0.16
Trim72Q1XH17 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim72Q1XH17 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim72Q1XH17 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim72Q1XH17 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim72Q1XH17 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim72Q1XH17 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim72Q1XH17 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim72Q1XH17 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.03■□□□□ 0.16
Trim72Q1XH17 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Trim72Q1XH17 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Trim72Q1XH17 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trim72Q1XH17 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
Trim72Q1XH17 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim72Q1XH17 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.02■□□□□ 0.16
Trim72Q1XH17 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Trim72Q1XH17 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim72Q1XH17 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim72Q1XH17 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trim72Q1XH17 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim72Q1XH17 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
Trim72Q1XH17 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim72Q1XH17 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.02■□□□□ 0.16
Trim72Q1XH17 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.02■□□□□ 0.16
Trim72Q1XH17 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trim72Q1XH17 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.02■□□□□ 0.16
Trim72Q1XH17 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.02■□□□□ 0.16
Trim72Q1XH17 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.02■□□□□ 0.16
Trim72Q1XH17 Psmb5-202ENSMUST00000227257 622 ntBASIC16.02■□□□□ 0.16
Trim72Q1XH17 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim72Q1XH17 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trim72Q1XH17 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim72Q1XH17 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim72Q1XH17 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim72Q1XH17 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim72Q1XH17 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trim72Q1XH17 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim72Q1XH17 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Trim72Q1XH17 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms