Protein–RNA interactions for Protein: Q04683

Cxcr5, C-X-C chemokine receptor type 5, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr5Q04683 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cxcr5Q04683 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcr5Q04683 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcr5Q04683 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcr5Q04683 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcr5Q04683 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cxcr5Q04683 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcr5Q04683 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcr5Q04683 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcr5Q04683 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcr5Q04683 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.34□□□□□ -0.11
Cxcr5Q04683 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcr5Q04683 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcr5Q04683 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcr5Q04683 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcr5Q04683 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cxcr5Q04683 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cxcr5Q04683 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cxcr5Q04683 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.33□□□□□ -0.11
Cxcr5Q04683 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cxcr5Q04683 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Cxcr5Q04683 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcr5Q04683 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcr5Q04683 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcr5Q04683 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcr5Q04683 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcr5Q04683 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Cxcr5Q04683 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cxcr5Q04683 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cxcr5Q04683 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcr5Q04683 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcr5Q04683 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcr5Q04683 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcr5Q04683 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcr5Q04683 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcr5Q04683 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.33□□□□□ -0.12
Cxcr5Q04683 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcr5Q04683 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcr5Q04683 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcr5Q04683 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcr5Q04683 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcr5Q04683 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.32□□□□□ -0.12
Cxcr5Q04683 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcr5Q04683 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcr5Q04683 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Cxcr5Q04683 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcr5Q04683 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcr5Q04683 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.32□□□□□ -0.12
Cxcr5Q04683 Gm7284-201ENSMUST00000131667 944 ntBASIC14.32□□□□□ -0.12
Cxcr5Q04683 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.32□□□□□ -0.12
Cxcr5Q04683 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcr5Q04683 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcr5Q04683 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcr5Q04683 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcr5Q04683 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcr5Q04683 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Cxcr5Q04683 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcr5Q04683 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcr5Q04683 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cxcr5Q04683 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cxcr5Q04683 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcr5Q04683 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcr5Q04683 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcr5Q04683 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cxcr5Q04683 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcr5Q04683 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcr5Q04683 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcr5Q04683 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcr5Q04683 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcr5Q04683 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcr5Q04683 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcr5Q04683 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcr5Q04683 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcr5Q04683 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.31□□□□□ -0.12
Cxcr5Q04683 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcr5Q04683 Gm13836-201ENSMUST00000121159 501 ntBASIC14.31□□□□□ -0.12
Cxcr5Q04683 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcr5Q04683 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcr5Q04683 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.31□□□□□ -0.12
Cxcr5Q04683 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.31□□□□□ -0.12
Cxcr5Q04683 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.31□□□□□ -0.12
Cxcr5Q04683 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcr5Q04683 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cxcr5Q04683 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcr5Q04683 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcr5Q04683 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cxcr5Q04683 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cxcr5Q04683 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcr5Q04683 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcr5Q04683 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcr5Q04683 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcr5Q04683 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcr5Q04683 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Cxcr5Q04683 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcr5Q04683 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcr5Q04683 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcr5Q04683 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcr5Q04683 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cxcr5Q04683 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.3□□□□□ -0.12
Cxcr5Q04683 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms