Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Gm17971-201ENSMUST00000190239 806 ntBASIC15.13■□□□□ 0.01
Pfdn6Q03958 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.13■□□□□ 0.01
Pfdn6Q03958 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pfdn6Q03958 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pfdn6Q03958 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Pfdn6Q03958 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.13■□□□□ 0.01
Pfdn6Q03958 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pfdn6Q03958 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pfdn6Q03958 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pfdn6Q03958 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pfdn6Q03958 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pfdn6Q03958 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pfdn6Q03958 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pfdn6Q03958 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
Pfdn6Q03958 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pfdn6Q03958 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pfdn6Q03958 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pfdn6Q03958 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.12■□□□□ 0.01
Pfdn6Q03958 Gm7230-201ENSMUST00000173026 815 ntBASIC15.12■□□□□ 0.01
Pfdn6Q03958 Mir8098-201ENSMUST00000184011 137 ntBASIC15.12■□□□□ 0.01
Pfdn6Q03958 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.12■□□□□ 0.01
Pfdn6Q03958 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.12■□□□□ 0.01
Pfdn6Q03958 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Pfdn6Q03958 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pfdn6Q03958 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pfdn6Q03958 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Pfdn6Q03958 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Pfdn6Q03958 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.12■□□□□ 0.01
Pfdn6Q03958 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pfdn6Q03958 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pfdn6Q03958 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pfdn6Q03958 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pfdn6Q03958 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pfdn6Q03958 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pfdn6Q03958 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pfdn6Q03958 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pfdn6Q03958 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pfdn6Q03958 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pfdn6Q03958 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pfdn6Q03958 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pfdn6Q03958 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pfdn6Q03958 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pfdn6Q03958 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pfdn6Q03958 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pfdn6Q03958 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pfdn6Q03958 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Pfdn6Q03958 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pfdn6Q03958 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.11■□□□□ 0.01
Pfdn6Q03958 Gm28659-201ENSMUST00000188013 759 ntBASIC15.11■□□□□ 0.01
Pfdn6Q03958 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.11■□□□□ 0.01
Pfdn6Q03958 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.11■□□□□ 0.01
Pfdn6Q03958 Gm10819-201ENSMUST00000099988 561 ntBASIC15.11■□□□□ 0.01
Pfdn6Q03958 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pfdn6Q03958 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pfdn6Q03958 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pfdn6Q03958 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pfdn6Q03958 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Pfdn6Q03958 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pfdn6Q03958 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Pfdn6Q03958 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pfdn6Q03958 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pfdn6Q03958 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Pfdn6Q03958 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pfdn6Q03958 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pfdn6Q03958 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pfdn6Q03958 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pfdn6Q03958 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pfdn6Q03958 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pfdn6Q03958 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pfdn6Q03958 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pfdn6Q03958 Gm11764-201ENSMUST00000120221 623 ntBASIC15.1■□□□□ 0.01
Pfdn6Q03958 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Pfdn6Q03958 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pfdn6Q03958 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.1■□□□□ 0.01
Pfdn6Q03958 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pfdn6Q03958 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.1■□□□□ 0.01
Pfdn6Q03958 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pfdn6Q03958 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.1■□□□□ 0.01
Pfdn6Q03958 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pfdn6Q03958 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Pfdn6Q03958 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Pfdn6Q03958 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Pfdn6Q03958 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.1■□□□□ 0.01
Pfdn6Q03958 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pfdn6Q03958 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pfdn6Q03958 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pfdn6Q03958 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.1■□□□□ 0.01
Pfdn6Q03958 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Pfdn6Q03958 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pfdn6Q03958 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pfdn6Q03958 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.1■□□□□ 0.01
Pfdn6Q03958 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pfdn6Q03958 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pfdn6Q03958 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.1■□□□□ 0.01
Pfdn6Q03958 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Pfdn6Q03958 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Pfdn6Q03958 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pfdn6Q03958 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pfdn6Q03958 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pfdn6Q03958 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms