Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Xrn1P97789 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Xrn1P97789 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Xrn1P97789 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Xrn1P97789 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Xrn1P97789 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Xrn1P97789 Gm12585-201ENSMUST00000117307 290 ntBASIC21.1■□□□□ 0.97
Xrn1P97789 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Xrn1P97789 Mir7654-201ENSMUST00000185082 70 ntBASIC21.1■□□□□ 0.97
Xrn1P97789 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC21.1■□□□□ 0.97
Xrn1P97789 AC121804.3-201ENSMUST00000223420 295 ntBASIC21.1■□□□□ 0.97
Xrn1P97789 AC154846.1-201ENSMUST00000226278 862 ntBASIC21.1■□□□□ 0.97
Xrn1P97789 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Xrn1P97789 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC21.1■□□□□ 0.97
Xrn1P97789 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Xrn1P97789 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Xrn1P97789 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Xrn1P97789 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Xrn1P97789 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Xrn1P97789 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Xrn1P97789 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Xrn1P97789 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Xrn1P97789 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC21.09■□□□□ 0.97
Xrn1P97789 Gm8463-201ENSMUST00000208573 613 ntBASIC21.09■□□□□ 0.97
Xrn1P97789 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC21.09■□□□□ 0.97
Xrn1P97789 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Xrn1P97789 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Xrn1P97789 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Xrn1P97789 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Xrn1P97789 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Xrn1P97789 Gm11839-201ENSMUST00000120647 1953 ntBASIC21.09■□□□□ 0.97
Xrn1P97789 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Xrn1P97789 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Xrn1P97789 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC21.09■□□□□ 0.97
Xrn1P97789 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Xrn1P97789 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Xrn1P97789 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Xrn1P97789 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC21.09■□□□□ 0.97
Xrn1P97789 Gm15806-201ENSMUST00000120696 955 ntBASIC21.09■□□□□ 0.97
Xrn1P97789 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Xrn1P97789 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Xrn1P97789 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Xrn1P97789 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Xrn1P97789 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Xrn1P97789 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Xrn1P97789 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Xrn1P97789 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Xrn1P97789 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC21.08■□□□□ 0.97
Xrn1P97789 Gm20628-201ENSMUST00000177363 3215 ntBASIC21.08■□□□□ 0.97
Xrn1P97789 Gm11425-201ENSMUST00000119608 498 ntBASIC21.08■□□□□ 0.97
Xrn1P97789 Gm15393-201ENSMUST00000120499 219 ntBASIC21.08■□□□□ 0.97
Xrn1P97789 Mir1894-201ENSMUST00000122802 81 ntBASIC21.08■□□□□ 0.97
Xrn1P97789 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Xrn1P97789 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
Xrn1P97789 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Xrn1P97789 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Xrn1P97789 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Xrn1P97789 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC21.08■□□□□ 0.97
Xrn1P97789 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Xrn1P97789 Gm9396-201ENSMUST00000076703 567 ntBASIC21.08■□□□□ 0.97
Xrn1P97789 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Xrn1P97789 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Xrn1P97789 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Xrn1P97789 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Xrn1P97789 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Xrn1P97789 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Xrn1P97789 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Xrn1P97789 Gm4984-201ENSMUST00000115987 360 ntBASIC21.07■□□□□ 0.96
Xrn1P97789 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Xrn1P97789 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Xrn1P97789 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Xrn1P97789 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Xrn1P97789 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Xrn1P97789 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Xrn1P97789 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC21.07■□□□□ 0.96
Xrn1P97789 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Xrn1P97789 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Xrn1P97789 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC21.07■□□□□ 0.96
Xrn1P97789 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Xrn1P97789 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Xrn1P97789 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC21.07■□□□□ 0.96
Xrn1P97789 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC21.07■□□□□ 0.96
Xrn1P97789 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Xrn1P97789 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Xrn1P97789 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Xrn1P97789 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Xrn1P97789 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Xrn1P97789 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Xrn1P97789 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC21.06■□□□□ 0.96
Xrn1P97789 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Xrn1P97789 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC21.06■□□□□ 0.96
Xrn1P97789 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC21.06■□□□□ 0.96
Xrn1P97789 Gm12390-201ENSMUST00000117897 397 ntBASIC21.06■□□□□ 0.96
Xrn1P97789 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Xrn1P97789 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Xrn1P97789 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC21.06■□□□□ 0.96
Xrn1P97789 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC21.06■□□□□ 0.96
Xrn1P97789 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Xrn1P97789 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Xrn1P97789 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms