Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.56■□□□□ 0.24
Hmgb1P63158 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hmgb1P63158 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Hmgb1P63158 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hmgb1P63158 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hmgb1P63158 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hmgb1P63158 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hmgb1P63158 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hmgb1P63158 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Hmgb1P63158 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Hmgb1P63158 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hmgb1P63158 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hmgb1P63158 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hmgb1P63158 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmgb1P63158 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.55■□□□□ 0.24
Hmgb1P63158 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Hmgb1P63158 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmgb1P63158 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmgb1P63158 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmgb1P63158 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmgb1P63158 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.55■□□□□ 0.24
Hmgb1P63158 Gm13418-201ENSMUST00000119097 944 ntBASIC16.55■□□□□ 0.24
Hmgb1P63158 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmgb1P63158 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
Hmgb1P63158 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.55■□□□□ 0.24
Hmgb1P63158 Gm6089-201ENSMUST00000197666 938 ntBASIC16.55■□□□□ 0.24
Hmgb1P63158 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmgb1P63158 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hmgb1P63158 Birc2-201ENSMUST00000054878 378 ntBASIC16.55■□□□□ 0.24
Hmgb1P63158 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Hmgb1P63158 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hmgb1P63158 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hmgb1P63158 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hmgb1P63158 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmgb1P63158 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.54■□□□□ 0.24
Hmgb1P63158 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgb1P63158 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgb1P63158 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Hmgb1P63158 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgb1P63158 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgb1P63158 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.54■□□□□ 0.24
Hmgb1P63158 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Hmgb1P63158 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgb1P63158 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.54■□□□□ 0.24
Hmgb1P63158 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.54■□□□□ 0.24
Hmgb1P63158 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgb1P63158 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.54■□□□□ 0.24
Hmgb1P63158 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgb1P63158 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgb1P63158 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.54■□□□□ 0.24
Hmgb1P63158 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
Hmgb1P63158 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgb1P63158 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgb1P63158 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgb1P63158 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.54■□□□□ 0.24
Hmgb1P63158 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgb1P63158 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Hmgb1P63158 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgb1P63158 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgb1P63158 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgb1P63158 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgb1P63158 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgb1P63158 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.53■□□□□ 0.24
Hmgb1P63158 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgb1P63158 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgb1P63158 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgb1P63158 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Hmgb1P63158 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Hmgb1P63158 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgb1P63158 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgb1P63158 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.53■□□□□ 0.24
Hmgb1P63158 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.53■□□□□ 0.24
Hmgb1P63158 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgb1P63158 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgb1P63158 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgb1P63158 Gm44357-201ENSMUST00000195897 142 ntBASIC16.53■□□□□ 0.24
Hmgb1P63158 Gm19658-201ENSMUST00000196231 138 ntBASIC16.53■□□□□ 0.24
Hmgb1P63158 Gm44367-201ENSMUST00000196836 138 ntBASIC16.53■□□□□ 0.24
Hmgb1P63158 Gm44350-201ENSMUST00000197197 138 ntBASIC16.53■□□□□ 0.24
Hmgb1P63158 Gm44390-201ENSMUST00000197533 144 ntBASIC16.53■□□□□ 0.24
Hmgb1P63158 Gm44313-201ENSMUST00000198018 138 ntBASIC16.53■□□□□ 0.24
Hmgb1P63158 Gm44486-201ENSMUST00000198508 138 ntBASIC16.53■□□□□ 0.24
Hmgb1P63158 Gm44314-201ENSMUST00000199263 138 ntBASIC16.53■□□□□ 0.24
Hmgb1P63158 Gm44394-201ENSMUST00000199558 138 ntBASIC16.53■□□□□ 0.24
Hmgb1P63158 Gm44484-201ENSMUST00000199873 138 ntBASIC16.53■□□□□ 0.24
Hmgb1P63158 Gm44466-201ENSMUST00000200264 138 ntBASIC16.53■□□□□ 0.24
Hmgb1P63158 Gm44359-201ENSMUST00000200671 138 ntBASIC16.53■□□□□ 0.24
Hmgb1P63158 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.53■□□□□ 0.24
Hmgb1P63158 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgb1P63158 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.53■□□□□ 0.24
Hmgb1P63158 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgb1P63158 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgb1P63158 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgb1P63158 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgb1P63158 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgb1P63158 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgb1P63158 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgb1P63158 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hmgb1P63158 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hmgb1P63158 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms