Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sec61a1P61620 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sec61a1P61620 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sec61a1P61620 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sec61a1P61620 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sec61a1P61620 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
Sec61a1P61620 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sec61a1P61620 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sec61a1P61620 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sec61a1P61620 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sec61a1P61620 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sec61a1P61620 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Sec61a1P61620 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.28□□□□□ -0.28
Sec61a1P61620 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC13.28□□□□□ -0.28
Sec61a1P61620 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sec61a1P61620 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sec61a1P61620 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC13.28□□□□□ -0.28
Sec61a1P61620 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.28□□□□□ -0.28
Sec61a1P61620 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.28□□□□□ -0.28
Sec61a1P61620 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sec61a1P61620 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sec61a1P61620 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Sec61a1P61620 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sec61a1P61620 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sec61a1P61620 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sec61a1P61620 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sec61a1P61620 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sec61a1P61620 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sec61a1P61620 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sec61a1P61620 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sec61a1P61620 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sec61a1P61620 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sec61a1P61620 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sec61a1P61620 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.27□□□□□ -0.29
Sec61a1P61620 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Sec61a1P61620 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sec61a1P61620 Gm25745-201ENSMUST00000174945 133 ntBASIC13.27□□□□□ -0.29
Sec61a1P61620 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Sec61a1P61620 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sec61a1P61620 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Sec61a1P61620 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Sec61a1P61620 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Sec61a1P61620 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sec61a1P61620 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sec61a1P61620 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Sec61a1P61620 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sec61a1P61620 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Sec61a1P61620 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.27□□□□□ -0.29
Sec61a1P61620 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sec61a1P61620 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sec61a1P61620 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sec61a1P61620 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sec61a1P61620 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sec61a1P61620 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sec61a1P61620 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Sec61a1P61620 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sec61a1P61620 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sec61a1P61620 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sec61a1P61620 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sec61a1P61620 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sec61a1P61620 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.26□□□□□ -0.29
Sec61a1P61620 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sec61a1P61620 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Sec61a1P61620 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sec61a1P61620 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sec61a1P61620 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sec61a1P61620 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC13.26□□□□□ -0.29
Sec61a1P61620 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sec61a1P61620 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.26□□□□□ -0.29
Sec61a1P61620 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.26□□□□□ -0.29
Sec61a1P61620 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sec61a1P61620 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sec61a1P61620 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Sec61a1P61620 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sec61a1P61620 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Sec61a1P61620 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sec61a1P61620 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.26□□□□□ -0.29
Sec61a1P61620 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Sec61a1P61620 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sec61a1P61620 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sec61a1P61620 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Sec61a1P61620 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a1P61620 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a1P61620 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.25□□□□□ -0.29
Sec61a1P61620 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a1P61620 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a1P61620 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a1P61620 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Sec61a1P61620 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Sec61a1P61620 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a1P61620 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a1P61620 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a1P61620 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a1P61620 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a1P61620 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a1P61620 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a1P61620 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a1P61620 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a1P61620 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a1P61620 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms